Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.76□□□□□ -1.81
COPB1P53618 RN7SKP219-201ENST00000516825 296 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC068587.5-201ENST00000528506 175 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AP005435.4-201ENST00000529514 284 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.76□□□□□ -1.81
COPB1P53618 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.76□□□□□ -1.81
COPB1P53618 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.76□□□□□ -1.81
COPB1P53618 AC024619.4-201ENST00000580924 316 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AP001029.3-201ENST00000588063 596 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.76□□□□□ -1.81
COPB1P53618 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.76□□□□□ -1.81
COPB1P53618 AC006116.10-201ENST00000591836 581 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC069200.1-201ENST00000609511 323 ntBASIC3.76□□□□□ -1.81
COPB1P53618 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
COPB1P53618 AC010338.1-201ENST00000621823 717 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.76□□□□□ -1.81
COPB1P53618 AC007496.3-201ENST00000624987 3443 ntBASIC3.76□□□□□ -1.81
COPB1P53618 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPB1P53618 MTND5P3-201ENST00000438536 1800 ntBASIC3.76□□□□□ -1.81
COPB1P53618 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPB1P53618 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
COPB1P53618 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
COPB1P53618 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
COPB1P53618 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COPB1P53618 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COPB1P53618 RNU6-1284P-201ENST00000363701 100 ntBASIC3.75□□□□□ -1.81
COPB1P53618 RNU6-960P-201ENST00000364056 120 ntBASIC3.75□□□□□ -1.81
COPB1P53618 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COPB1P53618 RNU6-328P-201ENST00000390887 106 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC126124.2-201ENST00000413542 321 ntBASIC3.75□□□□□ -1.81
COPB1P53618 UBE2FP1-201ENST00000416536 447 ntBASIC3.75□□□□□ -1.81
COPB1P53618 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.75□□□□□ -1.81
COPB1P53618 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.75□□□□□ -1.81
COPB1P53618 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.75□□□□□ -1.81
COPB1P53618 AC008264.1-201ENST00000447612 367 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AL162389.1-201ENST00000449233 177 ntBASIC3.75□□□□□ -1.81
COPB1P53618 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.75□□□□□ -1.81
COPB1P53618 PRSS3P4-201ENST00000453323 162 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC234775.1-201ENST00000454247 670 ntBASIC3.75□□□□□ -1.81
COPB1P53618 HMGN1P18-201ENST00000457642 277 ntBASIC3.75□□□□□ -1.81
COPB1P53618 RPL23AP67-201ENST00000465341 474 ntBASIC3.75□□□□□ -1.81
COPB1P53618 EIF4EP3-201ENST00000498782 656 ntBASIC3.75□□□□□ -1.81
COPB1P53618 RPL38P4-201ENST00000502376 214 ntBASIC3.75□□□□□ -1.81
COPB1P53618 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.75□□□□□ -1.81
COPB1P53618 LRRC34P2-201ENST00000514850 553 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.75□□□□□ -1.81
COPB1P53618 HMGN1P28-201ENST00000521340 364 ntBASIC3.75□□□□□ -1.81
COPB1P53618 OR4R3P-201ENST00000525084 838 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC018630.1-201ENST00000541376 925 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC004024.1-201ENST00000549244 247 ntBASIC3.75□□□□□ -1.81
COPB1P53618 MIR4719-201ENST00000585233 84 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC010525.2-201ENST00000590920 195 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.75□□□□□ -1.81
COPB1P53618 AC012443.1-201ENST00000605605 231 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AP001486.3-201ENST00000615334 372 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AL450472.3-201ENST00000615578 367 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AL353748.2-201ENST00000622148 471 ntBASIC3.75□□□□□ -1.81
COPB1P53618 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.75□□□□□ -1.81
COPB1P53618 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.75□□□□□ -1.81
COPB1P53618 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.75□□□□□ -1.81
COPB1P53618 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COPB1P53618 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COPB1P53618 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COPB1P53618 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 MIR208A-201ENST00000362287 71 ntBASIC3.74□□□□□ -1.81
COPB1P53618 Y_RNA.263-201ENST00000364659 114 ntBASIC3.74□□□□□ -1.81
COPB1P53618 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 SSXP9-201ENST00000417503 292 ntBASIC3.74□□□□□ -1.81
COPB1P53618 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.74□□□□□ -1.81
COPB1P53618 AC099677.1-201ENST00000420575 175 ntBASIC3.74□□□□□ -1.81
COPB1P53618 AC018630.2-202ENST00000422992 927 ntBASIC3.74□□□□□ -1.81
COPB1P53618 MTND4P28-201ENST00000426217 387 ntBASIC3.74□□□□□ -1.81
COPB1P53618 RPL36AP6-201ENST00000435770 321 ntBASIC3.74□□□□□ -1.81
COPB1P53618 AC090774.1-201ENST00000435925 246 ntBASIC3.74□□□□□ -1.81
COPB1P53618 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.74□□□□□ -1.81
COPB1P53618 RPS3AP12-201ENST00000443616 753 ntBASIC3.74□□□□□ -1.81
COPB1P53618 UBE2V1P7-201ENST00000446395 340 ntBASIC3.74□□□□□ -1.81
COPB1P53618 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.74□□□□□ -1.81
COPB1P53618 AC092436.1-201ENST00000506450 503 ntBASIC3.74□□□□□ -1.81
COPB1P53618 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.74□□□□□ -1.81
COPB1P53618 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.74□□□□□ -1.81
COPB1P53618 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.74□□□□□ -1.81
COPB1P53618 AC125611.2-201ENST00000551907 647 ntBASIC3.74□□□□□ -1.81
COPB1P53618 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.74□□□□□ -1.81
COPB1P53618 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.74□□□□□ -1.81
COPB1P53618 AL121772.2-201ENST00000614331 297 ntBASIC3.74□□□□□ -1.81
COPB1P53618 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.74□□□□□ -1.81
COPB1P53618 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPB1P53618 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
COPB1P53618 AC017071.1-201ENST00000564407 2204 ntBASIC3.74□□□□□ -1.81
COPB1P53618 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms