Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDX1P52945 AC138915.3-201ENST00000562908 1389 ntBASIC3.04□□□□□ -1.92
PDX1P52945 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDX1P52945 RPL7P26-201ENST00000333817 754 ntBASIC3.04□□□□□ -1.92
PDX1P52945 Y_RNA.41-201ENST00000362646 102 ntBASIC3.04□□□□□ -1.92
PDX1P52945 SNORD56.2-201ENST00000363242 71 ntBASIC3.04□□□□□ -1.92
PDX1P52945 RNU6-188P-201ENST00000364207 107 ntBASIC3.04□□□□□ -1.92
PDX1P52945 NDUFS5P1-201ENST00000405668 289 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AL591034.1-201ENST00000407447 340 ntBASIC3.04□□□□□ -1.92
PDX1P52945 RNU2-8P-201ENST00000410727 190 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.04□□□□□ -1.92
PDX1P52945 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.04□□□□□ -1.92
PDX1P52945 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.04□□□□□ -1.92
PDX1P52945 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.04□□□□□ -1.92
PDX1P52945 AC105252.1-201ENST00000503089 286 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.04□□□□□ -1.92
PDX1P52945 SCARNA24.1-201ENST00000516465 137 ntBASIC3.04□□□□□ -1.92
PDX1P52945 SCARNA20.6-201ENST00000517251 106 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.04□□□□□ -1.92
PDX1P52945 AP003392.2-201ENST00000527269 208 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.04□□□□□ -1.92
PDX1P52945 AC093012.1-202ENST00000549403 582 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AC128657.1-201ENST00000549459 145 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.04□□□□□ -1.92
PDX1P52945 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.04□□□□□ -1.92
PDX1P52945 AC073648.5-201ENST00000603502 305 ntBASIC3.04□□□□□ -1.92
PDX1P52945 AC007619.2-201ENST00000605743 379 ntBASIC3.04□□□□□ -1.92
PDX1P52945 MIR98-201ENST00000606724 119 ntBASIC3.04□□□□□ -1.92
PDX1P52945 uc_338.25-201ENST00000613756 156 ntBASIC3.04□□□□□ -1.92
PDX1P52945 LRRC77P-213ENST00000637727 880 ntBASIC3.04□□□□□ -1.92
PDX1P52945 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.04□□□□□ -1.92
PDX1P52945 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDX1P52945 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDX1P52945 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.04□□□□□ -1.92
PDX1P52945 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
PDX1P52945 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.03□□□□□ -1.92
PDX1P52945 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PDX1P52945 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDX1P52945 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDX1P52945 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDX1P52945 Y_RNA.22-201ENST00000362492 102 ntBASIC3.03□□□□□ -1.92
PDX1P52945 RNU6-169P-201ENST00000365336 107 ntBASIC3.03□□□□□ -1.92
PDX1P52945 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDX1P52945 EI24P2-201ENST00000397776 1076 ntBASIC3.03□□□□□ -1.92
PDX1P52945 MTCO3P41-201ENST00000414801 328 ntBASIC3.03□□□□□ -1.92
PDX1P52945 Z85995.1-201ENST00000415547 335 ntBASIC3.03□□□□□ -1.92
PDX1P52945 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.03□□□□□ -1.92
PDX1P52945 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.03□□□□□ -1.92
PDX1P52945 Z99127.3-201ENST00000448158 395 ntBASIC3.03□□□□□ -1.92
PDX1P52945 ELOCP23-201ENST00000452014 332 ntBASIC3.03□□□□□ -1.92
PDX1P52945 MTND2P24-201ENST00000453434 806 ntBASIC3.03□□□□□ -1.92
PDX1P52945 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.03□□□□□ -1.92
PDX1P52945 RPS27AP1-201ENST00000475545 471 ntBASIC3.03□□□□□ -1.92
PDX1P52945 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.03□□□□□ -1.92
PDX1P52945 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.03□□□□□ -1.92
PDX1P52945 SNORA64.4-201ENST00000516632 81 ntBASIC3.03□□□□□ -1.92
PDX1P52945 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDX1P52945 CASP1P1-201ENST00000526345 212 ntBASIC3.03□□□□□ -1.92
PDX1P52945 AC124947.2-202ENST00000552735 133 ntBASIC3.03□□□□□ -1.92
PDX1P52945 AC034105.3-201ENST00000565294 442 ntBASIC3.03□□□□□ -1.92
PDX1P52945 GLUD1P4-201ENST00000590914 418 ntBASIC3.03□□□□□ -1.92
PDX1P52945 AC245014.2-201ENST00000603689 287 ntBASIC3.03□□□□□ -1.92
PDX1P52945 AC006023.1-201ENST00000603944 259 ntBASIC3.03□□□□□ -1.92
PDX1P52945 AC246785.4-201ENST00000605374 287 ntBASIC3.03□□□□□ -1.92
PDX1P52945 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.03□□□□□ -1.92
PDX1P52945 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PDX1P52945 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDX1P52945 AC008568.2-201ENST00000623862 2313 ntBASIC3.03□□□□□ -1.92
PDX1P52945 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDX1P52945 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PDX1P52945 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
PDX1P52945 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.03□□□□□ -1.93
PDX1P52945 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDX1P52945 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
PDX1P52945 HSPE1P11-201ENST00000339579 310 ntBASIC3.02□□□□□ -1.93
PDX1P52945 SNORD56.3-201ENST00000363507 71 ntBASIC3.02□□□□□ -1.93
PDX1P52945 RNU6-7-201ENST00000364784 107 ntBASIC3.02□□□□□ -1.93
PDX1P52945 RNU6-8-201ENST00000365467 107 ntBASIC3.02□□□□□ -1.93
PDX1P52945 RNU5E-6P-201ENST00000365574 115 ntBASIC3.02□□□□□ -1.93
PDX1P52945 SMIM11P1-201ENST00000369586 178 ntBASIC3.02□□□□□ -1.93
PDX1P52945 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.02□□□□□ -1.93
PDX1P52945 RNU6-701P-201ENST00000384059 107 ntBASIC3.02□□□□□ -1.93
PDX1P52945 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDX1P52945 UBE2V1P2-201ENST00000397758 440 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AL139397.2-201ENST00000404529 772 ntBASIC3.02□□□□□ -1.93
PDX1P52945 RNA5SP293-201ENST00000410527 113 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AC245291.1-201ENST00000419501 328 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.02□□□□□ -1.93
PDX1P52945 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.02□□□□□ -1.93
PDX1P52945 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.02□□□□□ -1.93
PDX1P52945 RPL23AP30-201ENST00000432419 501 ntBASIC3.02□□□□□ -1.93
PDX1P52945 TAAR7P-201ENST00000436141 242 ntBASIC3.02□□□□□ -1.93
PDX1P52945 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.02□□□□□ -1.93
PDX1P52945 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.02□□□□□ -1.93
PDX1P52945 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.02□□□□□ -1.93
PDX1P52945 C1DP4-201ENST00000455429 424 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.02□□□□□ -1.93
PDX1P52945 RPS20P20-201ENST00000460498 340 ntBASIC3.02□□□□□ -1.93
PDX1P52945 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.02□□□□□ -1.93
PDX1P52945 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms