Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC068880.4-201ENST00000623082 495 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC012640.5-201ENST00000623897 319 ntBASIC1.96□□□□□ -2.1
RPA3P35244 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.96□□□□□ -2.1
RPA3P35244 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPA3P35244 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.95□□□□□ -2.1
RPA3P35244 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
RPA3P35244 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.95□□□□□ -2.1
RPA3P35244 Y_RNA.408-201ENST00000383987 102 ntBASIC1.95□□□□□ -2.1
RPA3P35244 RNU6-1122P-201ENST00000384449 107 ntBASIC1.95□□□□□ -2.1
RPA3P35244 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.95□□□□□ -2.1
RPA3P35244 CYCSP48-201ENST00000417124 323 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AL451054.2-201ENST00000420896 202 ntBASIC1.95□□□□□ -2.1
RPA3P35244 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
RPA3P35244 MED14P1-201ENST00000430517 648 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA3P35244 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA3P35244 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA3P35244 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.95□□□□□ -2.1
RPA3P35244 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA3P35244 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.95□□□□□ -2.1
RPA3P35244 KLF3P2-201ENST00000465138 268 ntBASIC1.95□□□□□ -2.1
RPA3P35244 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.95□□□□□ -2.1
RPA3P35244 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
RPA3P35244 MTCYBP16-201ENST00000509187 1129 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.95□□□□□ -2.1
RPA3P35244 AC118942.1-201ENST00000529674 1035 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AC010186.2-204ENST00000537668 439 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AL359212.1-201ENST00000556608 614 ntBASIC1.95□□□□□ -2.1
RPA3P35244 MIR5571-201ENST00000577998 113 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AC008121.1-201ENST00000603244 268 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AL139344.1-201ENST00000605228 195 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AC099785.1-201ENST00000605697 437 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AC103710.1-201ENST00000610003 901 ntBASIC1.95□□□□□ -2.1
RPA3P35244 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.95□□□□□ -2.1
RPA3P35244 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AL589743.7-201ENST00000612637 233 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AL445264.1-201ENST00000621719 171 ntBASIC1.95□□□□□ -2.1
RPA3P35244 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.95□□□□□ -2.1
RPA3P35244 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
RPA3P35244 AC010889.1-201ENST00000566193 2666 ntBASIC1.94□□□□□ -2.1
RPA3P35244 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RPA3P35244 AL109809.4-201ENST00000603520 2185 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
RPA3P35244 RNU6-236P-201ENST00000363886 106 ntBASIC1.94□□□□□ -2.1
RPA3P35244 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.94□□□□□ -2.1
RPA3P35244 AC068533.2-201ENST00000411872 306 ntBASIC1.94□□□□□ -2.1
RPA3P35244 TPMTP3-201ENST00000411928 735 ntBASIC1.94□□□□□ -2.1
RPA3P35244 BPY2DP-201ENST00000422208 265 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.94□□□□□ -2.1
RPA3P35244 AC007560.1-201ENST00000426912 237 ntBASIC1.94□□□□□ -2.1
RPA3P35244 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPA3P35244 PTGES3P1-201ENST00000439531 483 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.94□□□□□ -2.1
RPA3P35244 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.94□□□□□ -2.1
RPA3P35244 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPA3P35244 RPL38P4-201ENST00000502376 214 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AC096571.1-202ENST00000506634 735 ntBASIC1.94□□□□□ -2.1
RPA3P35244 MTCO3P27-201ENST00000514397 196 ntBASIC1.94□□□□□ -2.1
RPA3P35244 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPA3P35244 RNU6-1225P-201ENST00000516336 65 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AP003355.1-201ENST00000518956 587 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.94□□□□□ -2.1
RPA3P35244 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.94□□□□□ -2.1
RPA3P35244 FAM92A1P1-201ENST00000528023 890 ntBASIC1.94□□□□□ -2.1
RPA3P35244 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.94□□□□□ -2.1
RPA3P35244 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.94□□□□□ -2.1
RPA3P35244 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.94□□□□□ -2.1
RPA3P35244 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPA3P35244 AC007349.4-201ENST00000608114 532 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AL138478.1-201ENST00000612252 832 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AC010133.1-201ENST00000615809 842 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AL357080.1-201ENST00000617394 239 ntBASIC1.94□□□□□ -2.1
RPA3P35244 AC098657.3-201ENST00000620434 263 ntBASIC1.94□□□□□ -2.1
RPA3P35244 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.94□□□□□ -2.1
RPA3P35244 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.94□□□□□ -2.1
RPA3P35244 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPA3P35244 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.94□□□□□ -2.1
RPA3P35244 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPA3P35244 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPA3P35244 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
RPA3P35244 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RPA3P35244 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPA3P35244 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPA3P35244 RNU6-1083P-201ENST00000384022 107 ntBASIC1.93□□□□□ -2.1
RPA3P35244 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.93□□□□□ -2.1
RPA3P35244 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.93□□□□□ -2.1
RPA3P35244 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.93□□□□□ -2.1
RPA3P35244 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPA3P35244 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.93□□□□□ -2.1
RPA3P35244 RPL18AP17-201ENST00000455326 198 ntBASIC1.93□□□□□ -2.1
RPA3P35244 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.93□□□□□ -2.1
RPA3P35244 AC072039.1-201ENST00000477611 581 ntBASIC1.93□□□□□ -2.1
RPA3P35244 AC106872.3-201ENST00000495104 446 ntBASIC1.93□□□□□ -2.1
RPA3P35244 RPS27AP10-201ENST00000496103 208 ntBASIC1.93□□□□□ -2.1
RPA3P35244 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.93□□□□□ -2.1
RPA3P35244 AC092436.1-201ENST00000506450 503 ntBASIC1.93□□□□□ -2.1
RPA3P35244 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.93□□□□□ -2.1
RPA3P35244 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.93□□□□□ -2.1
RPA3P35244 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms