Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC091965.2-201ENST00000512324 613 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 AC010889.1-201ENST00000566193 2666 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 AC078899.2-201ENST00000595282 212 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 AC005034.5-201ENST00000604219 466 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 AL020996.3-201ENST00000606617 222 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.37□□□□□ -2.19
CLIP1P30622 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.37□□□□□ -2.19
CLIP1P30622 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.37□□□□□ -2.19
CLIP1P30622 RNU6-37P-201ENST00000362692 107 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 RNU6-11P-201ENST00000364234 107 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLIP1P30622 RNU6-882P-201ENST00000391025 103 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.36□□□□□ -2.19
CLIP1P30622 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 AC244453.4-201ENST00000419150 388 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 AC246680.2-201ENST00000422106 389 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.36□□□□□ -2.19
CLIP1P30622 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.36□□□□□ -2.19
CLIP1P30622 AC244035.1-201ENST00000430042 390 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 RPL31P41-201ENST00000477967 372 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.36□□□□□ -2.19
CLIP1P30622 TPT1P8-201ENST00000510120 555 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.36□□□□□ -2.19
CLIP1P30622 MIR3616-201ENST00000584070 92 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 AC012443.1-201ENST00000605605 231 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 AC008669.1-201ENST00000565823 2178 ntBASIC1.36□□□□□ -2.19
CLIP1P30622 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.36□□□□□ -2.19
CLIP1P30622 AC007785.2-201ENST00000598627 1916 ntBASIC1.35□□□□□ -2.19
CLIP1P30622 MIR216A-201ENST00000385063 110 ntBASIC1.35□□□□□ -2.19
CLIP1P30622 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.35□□□□□ -2.19
CLIP1P30622 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.35□□□□□ -2.19
CLIP1P30622 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
CLIP1P30622 AC021087.2-201ENST00000504656 1203 ntBASIC1.35□□□□□ -2.19
CLIP1P30622 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.35□□□□□ -2.19
CLIP1P30622 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.35□□□□□ -2.19
CLIP1P30622 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.35□□□□□ -2.19
CLIP1P30622 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.35□□□□□ -2.19
CLIP1P30622 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLIP1P30622 SNORA51.12-201ENST00000384448 134 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AL512604.1-201ENST00000404812 257 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.34□□□□□ -2.19
CLIP1P30622 CBX3P6-201ENST00000430257 527 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.34□□□□□ -2.19
CLIP1P30622 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.34□□□□□ -2.19
CLIP1P30622 AC087884.1-201ENST00000469738 328 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AC107032.1-201ENST00000485945 480 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.34□□□□□ -2.19
CLIP1P30622 AP001960.1-201ENST00000506494 658 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 SNORA31.20-201ENST00000517111 133 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.34□□□□□ -2.19
CLIP1P30622 CR383656.8-201ENST00000549046 145 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.34□□□□□ -2.19
CLIP1P30622 AC040174.2-201ENST00000602701 465 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AC025165.5-201ENST00000602802 578 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AL450336.1-201ENST00000605180 586 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 AC243773.3-201ENST00000613270 256 ntBASIC1.34□□□□□ -2.19
CLIP1P30622 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CLIP1P30622 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
CLIP1P30622 RPS4XP3-201ENST00000398541 413 ntBASIC1.33□□□□□ -2.2
CLIP1P30622 SFR1P1-201ENST00000403720 688 ntBASIC1.33□□□□□ -2.2
CLIP1P30622 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.33□□□□□ -2.2
CLIP1P30622 THAP5P1-201ENST00000439089 262 ntBASIC1.33□□□□□ -2.2
CLIP1P30622 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.33□□□□□ -2.2
CLIP1P30622 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.33□□□□□ -2.2
CLIP1P30622 AL355812.1-201ENST00000603215 216 ntBASIC1.33□□□□□ -2.2
CLIP1P30622 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.33□□□□□ -2.2
CLIP1P30622 SNORA23-201ENST00000365128 182 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.32□□□□□ -2.2
CLIP1P30622 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.32□□□□□ -2.2
CLIP1P30622 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.32□□□□□ -2.2
CLIP1P30622 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.32□□□□□ -2.2
CLIP1P30622 AC023347.2-201ENST00000433994 462 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 AC004383.1-201ENST00000438135 289 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 AC117503.1-201ENST00000472241 394 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 RN7SKP277-201ENST00000516895 283 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLIP1P30622 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLIP1P30622 AC008555.8-201ENST00000623602 2168 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 Y_RNA.178-201ENST00000363832 102 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 SNORA68.1-201ENST00000364537 132 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 RPL23AP6-201ENST00000446637 472 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 NAP1L1P3-201ENST00000462291 880 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.32□□□□□ -2.2
CLIP1P30622 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.32□□□□□ -2.2
CLIP1P30622 RNU2-19P-201ENST00000517288 84 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 DEFB108E-201ENST00000524692 240 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.32□□□□□ -2.2
CLIP1P30622 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
CLIP1P30622 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
CLIP1P30622 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLIP1P30622 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLIP1P30622 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.31□□□□□ -2.2
CLIP1P30622 UBE2FP1-201ENST00000416536 447 ntBASIC1.31□□□□□ -2.2
CLIP1P30622 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.31□□□□□ -2.2
CLIP1P30622 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.31□□□□□ -2.2
CLIP1P30622 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.31□□□□□ -2.2
CLIP1P30622 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.31□□□□□ -2.2
CLIP1P30622 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.31□□□□□ -2.2
CLIP1P30622 AC135507.1-201ENST00000607214 561 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms