Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNGA1P29973 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNGA1P29973 RNU6-1060P-201ENST00000384664 107 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 RNU6-550P-201ENST00000391057 101 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 RNU4-46P-201ENST00000410818 138 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 RPL30P2-201ENST00000414021 291 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 AC080125.1-201ENST00000414888 684 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 AP000907.1-201ENST00000428428 510 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 HMGB1P31-201ENST00000437242 427 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.36□□□□□ -1.71
CNGA1P29973 MTND4P25-201ENST00000441039 533 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 DPPA3P1-201ENST00000448050 469 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.36□□□□□ -1.71
CNGA1P29973 RPL30P5-201ENST00000494923 336 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 SNORD60.2-201ENST00000516883 86 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 SUB1P1-201ENST00000524415 382 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 OR5B10P-201ENST00000532869 642 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.36□□□□□ -1.71
CNGA1P29973 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.36□□□□□ -1.71
CNGA1P29973 HIF1AP1-201ENST00000553642 175 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.36□□□□□ -1.71
CNGA1P29973 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.36□□□□□ -1.71
CNGA1P29973 AL138976.2-201ENST00000563989 694 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 MIR4644-201ENST00000579929 84 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 NRBF2P5-201ENST00000603087 788 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 AL161798.1-201ENST00000604630 131 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.36□□□□□ -1.71
CNGA1P29973 AC107294.1-201ENST00000609524 467 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 AL020991.1-201ENST00000612314 373 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 DISC2.1-201ENST00000612827 205 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CNGA1P29973 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
CNGA1P29973 AC093536.2-201ENST00000565257 1406 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CNGA1P29973 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.36□□□□□ -1.71
CNGA1P29973 RIOK3P1-201ENST00000418778 1528 ntBASIC4.36□□□□□ -1.71
CNGA1P29973 TPTE2P4-201ENST00000258589 1605 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNGA1P29973 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNGA1P29973 AC007785.2-201ENST00000598627 1916 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CNGA1P29973 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNGA1P29973 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNGA1P29973 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNGA1P29973 OR9R1P-201ENST00000412200 877 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 OR6C66P-201ENST00000414917 930 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.35□□□□□ -1.71
CNGA1P29973 AL159987.2-201ENST00000432754 307 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.35□□□□□ -1.71
CNGA1P29973 MTCO3P18-201ENST00000440206 761 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 RPS24P13-201ENST00000442520 397 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 AL160314.1-201ENST00000490836 438 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.35□□□□□ -1.71
CNGA1P29973 PRDX4P1-201ENST00000507189 574 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.35□□□□□ -1.71
CNGA1P29973 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.35□□□□□ -1.71
CNGA1P29973 TRAV28-201ENST00000557548 323 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.35□□□□□ -1.71
CNGA1P29973 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.35□□□□□ -1.71
CNGA1P29973 MIR5187-201ENST00000583479 76 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 RMST_3.1-201ENST00000611651 109 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 MIR3662-201ENST00000637030 95 ntBASIC4.35□□□□□ -1.71
CNGA1P29973 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNGA1P29973 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNGA1P29973 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNGA1P29973 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.35□□□□□ -1.71
CNGA1P29973 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNGA1P29973 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CNGA1P29973 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNGA1P29973 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNGA1P29973 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNGA1P29973 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNGA1P29973 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CNGA1P29973 Y_RNA.534-201ENST00000384599 112 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 NDUFB4P4-201ENST00000404822 243 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 HSPE1P8-201ENST00000406997 288 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 MIR1183-201ENST00000408856 89 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 RNU6-193P-201ENST00000410977 107 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.34□□□□□ -1.71
CNGA1P29973 BTF3L4P3-201ENST00000418879 476 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.34□□□□□ -1.71
CNGA1P29973 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.34□□□□□ -1.71
CNGA1P29973 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.34□□□□□ -1.71
CNGA1P29973 AC083863.1-201ENST00000438811 231 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 RNU7-180P-201ENST00000459240 63 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 RPL21P8-201ENST00000465083 535 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.34□□□□□ -1.71
CNGA1P29973 RPS23P3-201ENST00000470993 430 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.34□□□□□ -1.71
CNGA1P29973 RPL31P61-201ENST00000496160 376 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 EIF4EP3-201ENST00000498782 656 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 RPL38P4-201ENST00000502376 214 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.34□□□□□ -1.71
CNGA1P29973 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.34□□□□□ -1.71
CNGA1P29973 AC087369.1-201ENST00000520775 996 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 AC134698.4-201ENST00000523451 826 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 AC015917.1-201ENST00000579654 510 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 AC011471.1-201ENST00000585766 187 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.34□□□□□ -1.71
CNGA1P29973 AL158032.1-201ENST00000605401 106 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms