Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC027807.1-201ENST00000559921 996 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AC068135.2-201ENST00000569293 1028 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.77□□□□□ -1.97
PTPN4P29074 UBE2L4-201ENST00000587688 464 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 TPMTP1-201ENST00000592307 737 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.77□□□□□ -1.97
PTPN4P29074 RPL23AP88-201ENST00000605759 454 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AC007038.2-201ENST00000608095 740 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AC239868.4-201ENST00000608318 671 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AC103710.4-201ENST00000609301 899 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AL158801.5-201ENST00000623123 465 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
PTPN4P29074 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.77□□□□□ -1.97
PTPN4P29074 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN4P29074 AC092125.1-201ENST00000562568 1995 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN4P29074 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PTPN4P29074 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN4P29074 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PTPN4P29074 AF228730.1-201ENST00000397972 663 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AL049545.1-201ENST00000401856 572 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 RN7SKP140-201ENST00000411196 284 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN4P29074 AL451054.2-201ENST00000420896 202 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 CETN4P-201ENST00000432407 469 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN4P29074 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN4P29074 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN4P29074 MTCYBP39-201ENST00000437562 491 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN4P29074 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN4P29074 AL049734.2-201ENST00000441066 616 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 ELOCP30-201ENST00000447108 299 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN4P29074 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN4P29074 AC003982.1-202ENST00000469928 248 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 RPL31P41-201ENST00000477967 372 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN4P29074 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN4P29074 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN4P29074 RNU6-232P-201ENST00000517144 64 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AC093012.1-202ENST00000549403 582 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.76□□□□□ -1.97
PTPN4P29074 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN4P29074 AL133153.1-201ENST00000557756 303 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN4P29074 AC103810.1-201ENST00000579873 453 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 MIR3162-201ENST00000581818 82 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AL355877.2-201ENST00000603670 358 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AC107214.2-201ENST00000608204 634 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN4P29074 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AC092192.1-201ENST00000633154 1018 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 AC097655.1-201ENST00000635075 318 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN4P29074 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PTPN4P29074 CR848007.1-201ENST00000442354 1699 ntBASIC2.76□□□□□ -1.97
PTPN4P29074 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN4P29074 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN4P29074 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
PTPN4P29074 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PTPN4P29074 SNORA9.2-201ENST00000365361 133 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AL139095.1-201ENST00000404326 391 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 RPL19P1-201ENST00000411635 428 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 USP9YP26-201ENST00000421008 661 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AL365203.2-201ENST00000423444 196 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN4P29074 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 BNIP3P2-201ENST00000441221 577 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 RPL37P6-201ENST00000460682 294 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AL135752.1-201ENST00000479477 471 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 AC010486.2-201ENST00000505572 483 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AC005178.1-201ENST00000508392 440 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 HPRT1P3-201ENST00000539521 576 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN4P29074 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 AC138761.3-201ENST00000579993 334 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AC015871.2-201ENST00000603605 948 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AC091965.4-201ENST00000607691 587 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 SNHG22-203ENST00000617833 660 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN4P29074 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTPN4P29074 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PTPN4P29074 AC092593.1-201ENST00000515413 1815 ntBASIC2.75□□□□□ -1.97
PTPN4P29074 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
PTPN4P29074 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTPN4P29074 RNU6-553P-201ENST00000364047 96 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTPN4P29074 DEFA7P-201ENST00000382676 285 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RNA5SP184-201ENST00000411071 108 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RPL21P24-201ENST00000413752 448 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms