Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFRAP16234 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFRAP16234 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFRAP16234 RNU5E-5P-201ENST00000365379 116 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AL139397.2-201ENST00000404529 772 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFRAP16234 BMS1P22-201ENST00000414726 313 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AL513477.1-202ENST00000417061 214 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AC006366.1-201ENST00000422002 759 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFRAP16234 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFRAP16234 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFRAP16234 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFRAP16234 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFRAP16234 AC098826.2-201ENST00000452011 651 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AC083906.5-201ENST00000503722 328 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 RNA5SP290-201ENST00000517133 127 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 HSPE1P20-201ENST00000538133 289 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFRAP16234 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFRAP16234 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFRAP16234 RPS3AP4-201ENST00000555161 764 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFRAP16234 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFRAP16234 LARP7P3-201ENST00000579888 337 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 DPPA3P3-201ENST00000603842 430 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AL136363.1-201ENST00000605349 337 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AC012360.2-201ENST00000609349 391 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 BX664608.1-201ENST00000610519 487 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AL020991.1-201ENST00000612314 373 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 AC091953.2-201ENST00000623979 160 ntBASIC3.02□□□□□ -1.93
PDGFRAP16234 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PDGFRAP16234 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFRAP16234 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFRAP16234 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.01□□□□□ -1.93
PDGFRAP16234 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFRAP16234 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFRAP16234 RNU6-1167P-201ENST00000363227 94 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 Y_RNA.169-201ENST00000363745 96 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 Y_RNA.245-201ENST00000364493 95 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 NDUFS5P1-201ENST00000405668 289 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 RNA5SP492-201ENST00000411330 114 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 RPL19P1-201ENST00000411635 428 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 AC019097.1-201ENST00000424783 735 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 ELOCP14-201ENST00000428070 331 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 AL139132.1-201ENST00000431587 344 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFRAP16234 ELOCP7-201ENST00000439968 331 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 AC025750.2-201ENST00000442609 450 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFRAP16234 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFRAP16234 MTND4LP3-201ENST00000468320 276 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 AC026407.1-201ENST00000518369 204 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFRAP16234 AC022878.1-201ENST00000530684 149 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 AL137843.1-201ENST00000605078 385 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 AL031775.1-201ENST00000607014 887 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 RNU6-87P-201ENST00000607561 108 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 AC090115.4-201ENST00000609970 188 ntBASIC3.01□□□□□ -1.93
PDGFRAP16234 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.01□□□□□ -1.93
PDGFRAP16234 MTND4P4-201ENST00000439033 1366 ntBASIC3□□□□□ -1.93
PDGFRAP16234 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
PDGFRAP16234 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
PDGFRAP16234 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
PDGFRAP16234 RNU6-511P-201ENST00000363496 107 ntBASIC3□□□□□ -1.93
PDGFRAP16234 RNY4P16-201ENST00000364768 94 ntBASIC3□□□□□ -1.93
PDGFRAP16234 RNU6-1180P-201ENST00000364935 107 ntBASIC3□□□□□ -1.93
PDGFRAP16234 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3□□□□□ -1.93
PDGFRAP16234 MIR512-1-201ENST00000384913 84 ntBASIC3□□□□□ -1.93
PDGFRAP16234 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3□□□□□ -1.93
PDGFRAP16234 AL122016.1-201ENST00000403365 367 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AL451074.5-201ENST00000415894 435 ntBASIC3□□□□□ -1.93
PDGFRAP16234 BTF3L4P3-201ENST00000418879 476 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3□□□□□ -1.93
PDGFRAP16234 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3□□□□□ -1.93
PDGFRAP16234 RPS20P5-201ENST00000434808 360 ntBASIC3□□□□□ -1.93
PDGFRAP16234 UBE2D3P4-201ENST00000441973 436 ntBASIC3□□□□□ -1.93
PDGFRAP16234 MTND1P12-201ENST00000455231 147 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3□□□□□ -1.93
PDGFRAP16234 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3□□□□□ -1.93
PDGFRAP16234 SNORD97-201ENST00000459187 142 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AP001486.1-201ENST00000463339 476 ntBASIC3□□□□□ -1.93
PDGFRAP16234 RBM43P1-201ENST00000476891 1081 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3□□□□□ -1.93
PDGFRAP16234 AP006587.4-201ENST00000526053 529 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3□□□□□ -1.93
PDGFRAP16234 AC128657.1-201ENST00000549459 145 ntBASIC3□□□□□ -1.93
PDGFRAP16234 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3□□□□□ -1.93
PDGFRAP16234 AL391261.3-201ENST00000557194 520 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3□□□□□ -1.93
PDGFRAP16234 RPL23AP88-201ENST00000605759 454 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3□□□□□ -1.93
PDGFRAP16234 AC103710.2-201ENST00000609912 942 ntBASIC3□□□□□ -1.93
PDGFRAP16234 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3□□□□□ -1.93
PDGFRAP16234 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3□□□□□ -1.93
PDGFRAP16234 Z99129.2-201ENST00000619967 314 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AC068880.5-201ENST00000624331 290 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AC007494.3-201ENST00000624660 743 ntBASIC3□□□□□ -1.93
PDGFRAP16234 AC110079.1-202ENST00000635213 138 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms