Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.67□□□□□ -2.3
ACANP16112 MTND3P24-201ENST00000506306 329 ntBASIC0.67□□□□□ -2.3
ACANP16112 SCARNA1-201ENST00000517138 166 ntBASIC0.67□□□□□ -2.3
ACANP16112 AC009902.3-201ENST00000606235 2172 ntBASIC0.67□□□□□ -2.3
ACANP16112 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
ACANP16112 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ACANP16112 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
ACANP16112 SNORA51.2-201ENST00000364595 132 ntBASIC0.66□□□□□ -2.3
ACANP16112 OR1L1-202ENST00000373686 1083 ntBASIC0.66□□□□□ -2.3
ACANP16112 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
ACANP16112 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.66□□□□□ -2.3
ACANP16112 AC099548.1-201ENST00000421443 426 ntBASIC0.66□□□□□ -2.3
ACANP16112 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.66□□□□□ -2.3
ACANP16112 UBE2FP3-201ENST00000436366 524 ntBASIC0.66□□□□□ -2.3
ACANP16112 LSM1P1-201ENST00000438629 273 ntBASIC0.66□□□□□ -2.3
ACANP16112 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.66□□□□□ -2.3
ACANP16112 RNU1-98P-201ENST00000458992 160 ntBASIC0.66□□□□□ -2.3
ACANP16112 RPL31P58-201ENST00000469001 379 ntBASIC0.66□□□□□ -2.3
ACANP16112 AP004247.1-201ENST00000531556 1289 ntBASIC0.66□□□□□ -2.3
ACANP16112 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.66□□□□□ -2.3
ACANP16112 NBEAP1-201ENST00000554452 979 ntBASIC0.66□□□□□ -2.3
ACANP16112 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.66□□□□□ -2.3
ACANP16112 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.66□□□□□ -2.3
ACANP16112 AC009220.3-201ENST00000604318 586 ntBASIC0.66□□□□□ -2.3
ACANP16112 AL161734.1-201ENST00000609720 557 ntBASIC0.66□□□□□ -2.3
ACANP16112 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
ACANP16112 AL390240.1-201ENST00000612950 384 ntBASIC0.66□□□□□ -2.3
ACANP16112 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.66□□□□□ -2.3
ACANP16112 AC099654.7-201ENST00000635788 2127 ntBASIC0.66□□□□□ -2.3
ACANP16112 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.66□□□□□ -2.3
ACANP16112 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
ACANP16112 AL137003.2-201ENST00000606924 2538 ntBASIC0.66□□□□□ -2.3
ACANP16112 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ACANP16112 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
ACANP16112 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ACANP16112 RNU6-418P-201ENST00000384035 107 ntBASIC0.66□□□□□ -2.3
ACANP16112 SNORD23.1-201ENST00000408212 104 ntBASIC0.66□□□□□ -2.3
ACANP16112 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.66□□□□□ -2.3
ACANP16112 AC004854.1-201ENST00000440356 349 ntBASIC0.66□□□□□ -2.3
ACANP16112 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.66□□□□□ -2.3
ACANP16112 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.66□□□□□ -2.3
ACANP16112 MTCO3P35-201ENST00000485582 781 ntBASIC0.66□□□□□ -2.3
ACANP16112 RPS27P21-201ENST00000486977 252 ntBASIC0.66□□□□□ -2.3
ACANP16112 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.66□□□□□ -2.3
ACANP16112 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.66□□□□□ -2.3
ACANP16112 MTND2P13-201ENST00000577438 1039 ntBASIC0.66□□□□□ -2.3
ACANP16112 AC011330.2-201ENST00000621680 635 ntBASIC0.66□□□□□ -2.3
ACANP16112 RNU6-173P-201ENST00000364215 104 ntBASIC0.65□□□□□ -2.31
ACANP16112 RNU6-629P-201ENST00000384061 103 ntBASIC0.65□□□□□ -2.31
ACANP16112 AC097493.1-201ENST00000463958 372 ntBASIC0.65□□□□□ -2.31
ACANP16112 RNU1-61P-201ENST00000516107 151 ntBASIC0.65□□□□□ -2.31
ACANP16112 RNA5SP468-201ENST00000516782 93 ntBASIC0.65□□□□□ -2.31
ACANP16112 OR6C73P-201ENST00000546432 358 ntBASIC0.65□□□□□ -2.31
ACANP16112 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.65□□□□□ -2.31
ACANP16112 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
ACANP16112 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.65□□□□□ -2.31
ACANP16112 RNU6-43P-201ENST00000384302 107 ntBASIC0.65□□□□□ -2.31
ACANP16112 AC092745.2-202ENST00000411880 369 ntBASIC0.65□□□□□ -2.31
ACANP16112 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.65□□□□□ -2.31
ACANP16112 RPL17P49-201ENST00000443728 411 ntBASIC0.65□□□□□ -2.31
ACANP16112 RPS26P56-201ENST00000444468 240 ntBASIC0.65□□□□□ -2.31
ACANP16112 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.65□□□□□ -2.31
ACANP16112 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.65□□□□□ -2.31
ACANP16112 MRPS33P3-201ENST00000513456 322 ntBASIC0.65□□□□□ -2.31
ACANP16112 MTCO2P32-201ENST00000514865 403 ntBASIC0.65□□□□□ -2.31
ACANP16112 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.65□□□□□ -2.31
ACANP16112 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.65□□□□□ -2.31
ACANP16112 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.65□□□□□ -2.31
ACANP16112 AP003117.1-201ENST00000602771 554 ntBASIC0.65□□□□□ -2.31
ACANP16112 RNU6-16P-201ENST00000384385 107 ntBASIC0.64□□□□□ -2.31
ACANP16112 SNORA46.1-201ENST00000391069 153 ntBASIC0.64□□□□□ -2.31
ACANP16112 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.64□□□□□ -2.31
ACANP16112 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.64□□□□□ -2.31
ACANP16112 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.64□□□□□ -2.31
ACANP16112 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.64□□□□□ -2.31
ACANP16112 AC087465.1-201ENST00000560574 245 ntBASIC0.64□□□□□ -2.31
ACANP16112 Pinc.1-201ENST00000616452 154 ntBASIC0.64□□□□□ -2.31
ACANP16112 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
ACANP16112 OR5H6-203ENST00000642105 978 ntBASIC0.64□□□□□ -2.31
ACANP16112 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.64□□□□□ -2.31
ACANP16112 MIR153-1-201ENST00000384914 90 ntBASIC0.64□□□□□ -2.31
ACANP16112 Y_RNA.610-201ENST00000410681 103 ntBASIC0.64□□□□□ -2.31
ACANP16112 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.64□□□□□ -2.31
ACANP16112 SDAD1P3-201ENST00000427380 333 ntBASIC0.64□□□□□ -2.31
ACANP16112 HMGB1P38-201ENST00000490557 577 ntBASIC0.64□□□□□ -2.31
ACANP16112 AC105252.1-201ENST00000503089 286 ntBASIC0.64□□□□□ -2.31
ACANP16112 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.64□□□□□ -2.31
ACANP16112 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.64□□□□□ -2.31
ACANP16112 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.64□□□□□ -2.31
ACANP16112 SUB1P1-201ENST00000524415 382 ntBASIC0.64□□□□□ -2.31
ACANP16112 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
ACANP16112 AL133507.1-201ENST00000605269 557 ntBASIC0.64□□□□□ -2.31
ACANP16112 MIR6076-201ENST00000617521 113 ntBASIC0.64□□□□□ -2.31
ACANP16112 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.64□□□□□ -2.31
ACANP16112 ZNF37BP-203ENST00000452306 1352 ntBASIC0.63□□□□□ -2.31
ACANP16112 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
ACANP16112 RNU6-1305P-201ENST00000364353 104 ntBASIC0.63□□□□□ -2.31
ACANP16112 RNU4-7P-201ENST00000364758 141 ntBASIC0.63□□□□□ -2.31
ACANP16112 Y_RNA.457-201ENST00000384237 111 ntBASIC0.63□□□□□ -2.31
ACANP16112 MIR17-201ENST00000385012 84 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms