Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NID1P14543 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NID1P14543 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NID1P14543 Y_RNA.286-201ENST00000364813 102 ntBASIC4.73□□□□□ -1.65
NID1P14543 Y_RNA.308-201ENST00000365043 101 ntBASIC4.73□□□□□ -1.65
NID1P14543 RNU6-1130P-201ENST00000365434 107 ntBASIC4.73□□□□□ -1.65
NID1P14543 RNU6-395P-201ENST00000365662 106 ntBASIC4.73□□□□□ -1.65
NID1P14543 RNU1-106P-201ENST00000384382 164 ntBASIC4.73□□□□□ -1.65
NID1P14543 Y_RNA.488-201ENST00000384403 102 ntBASIC4.73□□□□□ -1.65
NID1P14543 MIR301A-201ENST00000385261 86 ntBASIC4.73□□□□□ -1.65
NID1P14543 U3.32-201ENST00000408116 212 ntBASIC4.73□□□□□ -1.65
NID1P14543 AL117339.3-201ENST00000418733 162 ntBASIC4.73□□□□□ -1.65
NID1P14543 AC104333.2-201ENST00000422630 192 ntBASIC4.73□□□□□ -1.65
NID1P14543 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.73□□□□□ -1.65
NID1P14543 MTCO1P39-201ENST00000426148 480 ntBASIC4.73□□□□□ -1.65
NID1P14543 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 HSPD1P21-201ENST00000436541 245 ntBASIC4.73□□□□□ -1.65
NID1P14543 PSMD10P3-201ENST00000437000 448 ntBASIC4.73□□□□□ -1.65
NID1P14543 AC005002.2-201ENST00000438228 269 ntBASIC4.73□□□□□ -1.65
NID1P14543 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 HIGD1AP2-201ENST00000446367 280 ntBASIC4.73□□□□□ -1.65
NID1P14543 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 AK3P2-201ENST00000507976 429 ntBASIC4.73□□□□□ -1.65
NID1P14543 APOOP4-201ENST00000513530 597 ntBASIC4.73□□□□□ -1.65
NID1P14543 GMPSP1-201ENST00000514075 579 ntBASIC4.73□□□□□ -1.65
NID1P14543 RNU6-1095P-201ENST00000516148 108 ntBASIC4.73□□□□□ -1.65
NID1P14543 AC024940.3-201ENST00000538551 316 ntBASIC4.73□□□□□ -1.65
NID1P14543 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NID1P14543 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.73□□□□□ -1.65
NID1P14543 AP005432.2-201ENST00000608162 586 ntBASIC4.73□□□□□ -1.65
NID1P14543 AC116447.1-201ENST00000613153 453 ntBASIC4.73□□□□□ -1.65
NID1P14543 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NID1P14543 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NID1P14543 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
NID1P14543 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.73□□□□□ -1.65
NID1P14543 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.73□□□□□ -1.65
NID1P14543 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NID1P14543 Z95331.1-201ENST00000623075 23112 ntBASIC4.73□□□□□ -1.65
NID1P14543 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.73□□□□□ -1.65
NID1P14543 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NID1P14543 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
NID1P14543 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NID1P14543 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NID1P14543 AP000756.2-201ENST00000624168 2567 ntBASIC4.72□□□□□ -1.65
NID1P14543 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NID1P14543 AC009229.4-201ENST00000623854 1947 ntBASIC4.72□□□□□ -1.65
NID1P14543 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NID1P14543 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
NID1P14543 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NID1P14543 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NID1P14543 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
NID1P14543 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.72□□□□□ -1.65
NID1P14543 RNA5SP52-201ENST00000362448 134 ntBASIC4.72□□□□□ -1.65
NID1P14543 RN7SKP113-201ENST00000363891 295 ntBASIC4.72□□□□□ -1.65
NID1P14543 RNU6-215P-201ENST00000365169 102 ntBASIC4.72□□□□□ -1.65
NID1P14543 RNU6-21P-201ENST00000384710 107 ntBASIC4.72□□□□□ -1.65
NID1P14543 MIR600-201ENST00000385007 98 ntBASIC4.72□□□□□ -1.65
NID1P14543 MIR765-201ENST00000390226 114 ntBASIC4.72□□□□□ -1.65
NID1P14543 AL133270.1-201ENST00000402635 279 ntBASIC4.72□□□□□ -1.65
NID1P14543 RNU4-30P-201ENST00000410245 143 ntBASIC4.72□□□□□ -1.65
NID1P14543 RNA5SP56-201ENST00000410277 118 ntBASIC4.72□□□□□ -1.65
NID1P14543 RN7SKP114-201ENST00000410327 279 ntBASIC4.72□□□□□ -1.65
NID1P14543 RNU6-603P-201ENST00000411403 107 ntBASIC4.72□□□□□ -1.65
NID1P14543 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.72□□□□□ -1.65
NID1P14543 AC007395.1-201ENST00000451333 677 ntBASIC4.72□□□□□ -1.65
NID1P14543 AL389915.2-201ENST00000454576 441 ntBASIC4.72□□□□□ -1.65
NID1P14543 OR7H2P-201ENST00000513483 306 ntBASIC4.72□□□□□ -1.65
NID1P14543 RNY3P16-201ENST00000516338 101 ntBASIC4.72□□□□□ -1.65
NID1P14543 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.72□□□□□ -1.65
NID1P14543 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.72□□□□□ -1.65
NID1P14543 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.72□□□□□ -1.65
NID1P14543 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.72□□□□□ -1.65
NID1P14543 AC126915.2-201ENST00000610957 190 ntBASIC4.72□□□□□ -1.65
NID1P14543 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.72□□□□□ -1.65
NID1P14543 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.72□□□□□ -1.65
NID1P14543 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
NID1P14543 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NID1P14543 AC107027.3-201ENST00000565095 3473 ntBASIC4.72□□□□□ -1.65
NID1P14543 AC063976.2-201ENST00000425667 3556 ntBASIC4.72□□□□□ -1.65
NID1P14543 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NID1P14543 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NID1P14543 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
NID1P14543 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NID1P14543 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
NID1P14543 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
NID1P14543 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
NID1P14543 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NID1P14543 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NID1P14543 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NID1P14543 UBE2L2-201ENST00000254302 429 ntBASIC4.71□□□□□ -1.66
NID1P14543 UBE2WP1-201ENST00000362030 340 ntBASIC4.71□□□□□ -1.66
NID1P14543 Y_RNA.33-201ENST00000362591 102 ntBASIC4.71□□□□□ -1.66
NID1P14543 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NID1P14543 SNORA2.3-201ENST00000383920 135 ntBASIC4.71□□□□□ -1.66
NID1P14543 RNU6-926P-201ENST00000384075 107 ntBASIC4.71□□□□□ -1.66
NID1P14543 RNU6-658P-201ENST00000384606 106 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms