Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.56□□□□□ -1.68
ITGA4P13612 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.56□□□□□ -1.68
ITGA4P13612 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 AC009812.4-201ENST00000569134 1805 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 AC011266.1-201ENST00000624119 3569 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 ZNF962P-201ENST00000443465 3140 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ITGA4P13612 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.56□□□□□ -1.68
ITGA4P13612 Y_RNA.133-201ENST00000363428 110 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 RNU6-95P-201ENST00000384697 107 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 RNU6-1105P-201ENST00000384774 107 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 RNU6-1106P-201ENST00000390845 107 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 RNU6-328P-201ENST00000390887 106 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 RPS12P23-201ENST00000419579 400 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 BX842559.1-201ENST00000419615 532 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.56□□□□□ -1.68
ITGA4P13612 AL162151.2-201ENST00000448875 158 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 RPL21P41-201ENST00000459863 264 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 RPL5P30-201ENST00000465511 891 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 AC104164.2-201ENST00000496953 495 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 AC026801.1-201ENST00000497178 464 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.56□□□□□ -1.68
ITGA4P13612 AC026782.1-201ENST00000512952 449 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 Y_RNA.670-201ENST00000516255 105 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.56□□□□□ -1.68
ITGA4P13612 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.56□□□□□ -1.68
ITGA4P13612 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.56□□□□□ -1.68
ITGA4P13612 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
ITGA4P13612 AC018462.2-201ENST00000605375 395 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 MIR432-201ENST00000606207 94 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 AC002044.1-201ENST00000606707 158 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.56□□□□□ -1.68
ITGA4P13612 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ITGA4P13612 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.56□□□□□ -1.68
ITGA4P13612 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ITGA4P13612 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
ITGA4P13612 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.55□□□□□ -1.68
ITGA4P13612 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.55□□□□□ -1.68
ITGA4P13612 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ITGA4P13612 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.55□□□□□ -1.68
ITGA4P13612 MIR448-201ENST00000362131 111 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RNU6-1309P-201ENST00000363305 108 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RNU6-266P-201ENST00000364225 107 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ITGA4P13612 Y_RNA.404-201ENST00000383978 102 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RPL21P65-201ENST00000406094 466 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ITGA4P13612 Y_RNA.594-201ENST00000410373 140 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RNU6-1050P-201ENST00000410388 107 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.55□□□□□ -1.68
ITGA4P13612 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.55□□□□□ -1.68
ITGA4P13612 AL358176.2-201ENST00000425769 204 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 HIGD1AP11-201ENST00000438361 280 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 AL359672.1-201ENST00000442302 409 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RNA5SP246-201ENST00000458909 119 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RPL37P6-201ENST00000460682 294 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RN7SL604P-201ENST00000492589 296 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.55□□□□□ -1.68
ITGA4P13612 RNU6-914P-201ENST00000516749 109 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 AC087854.1-201ENST00000519706 414 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.55□□□□□ -1.68
ITGA4P13612 AC026371.1-201ENST00000551867 419 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 AC022655.2-201ENST00000577280 318 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.55□□□□□ -1.68
ITGA4P13612 AC093227.2-201ENST00000589357 285 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 AC083806.3-201ENST00000614016 455 ntBASIC4.55□□□□□ -1.68
ITGA4P13612 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ITGA4P13612 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ITGA4P13612 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ITGA4P13612 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ITGA4P13612 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
ITGA4P13612 RLIMP1-201ENST00000339626 1680 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ITGA4P13612 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ITGA4P13612 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
ITGA4P13612 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ITGA4P13612 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ITGA4P13612 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ITGA4P13612 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.54□□□□□ -1.68
ITGA4P13612 AC138393.1-203ENST00000327086 343 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 SNORD74.4-201ENST00000364129 80 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 RNU6-371P-201ENST00000364283 108 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 RNU6-463P-201ENST00000384340 107 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 MIR1179-201ENST00000408703 91 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 RPL21P90-201ENST00000415692 466 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 MCFD2P1-201ENST00000417812 300 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 RBMY1KP-201ENST00000423480 476 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 AC018865.2-201ENST00000423631 129 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 AL160004.2-201ENST00000432935 350 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 AC236972.1-201ENST00000433225 199 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 RPL21P23-201ENST00000446654 460 ntBASIC4.54□□□□□ -1.68
ITGA4P13612 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms