Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNU6-1074P-201ENST00000383995 104 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RNY3P14-201ENST00000384309 102 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RNU6-1158P-201ENST00000391167 107 ntBASIC3.19□□□□□ -1.9
CDH1P12830 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH1P12830 AL136372.1-201ENST00000403060 228 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RNU2-9P-201ENST00000410194 145 ntBASIC3.19□□□□□ -1.9
CDH1P12830 Y_RNA.604-201ENST00000410574 102 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RPL21P24-201ENST00000413752 448 ntBASIC3.19□□□□□ -1.9
CDH1P12830 SDCBPP3-201ENST00000419629 891 ntBASIC3.19□□□□□ -1.9
CDH1P12830 MED13P1-201ENST00000428342 171 ntBASIC3.19□□□□□ -1.9
CDH1P12830 YME1L1P1-201ENST00000429435 297 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC097713.2-201ENST00000430199 356 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC005019.1-201ENST00000436455 431 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AL353572.1-201ENST00000442490 417 ntBASIC3.19□□□□□ -1.9
CDH1P12830 MTCO3P45-201ENST00000443036 613 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH1P12830 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH1P12830 AC022364.2-201ENST00000457963 554 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH1P12830 AC008481.1-201ENST00000463278 396 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RPL31P58-201ENST00000469001 379 ntBASIC3.19□□□□□ -1.9
CDH1P12830 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH1P12830 AC083798.1-201ENST00000472671 131 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RPL21P13-201ENST00000488305 481 ntBASIC3.19□□□□□ -1.9
CDH1P12830 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH1P12830 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
CDH1P12830 SNORA31.22-201ENST00000517204 135 ntBASIC3.19□□□□□ -1.9
CDH1P12830 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH1P12830 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH1P12830 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH1P12830 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH1P12830 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH1P12830 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH1P12830 NCAPGP2-201ENST00000557911 754 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH1P12830 HMGB1P6-201ENST00000569046 646 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH1P12830 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH1P12830 U1.23-201ENST00000610293 146 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC019176.2-201ENST00000611579 315 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AL355073.2-201ENST00000612106 557 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RNU1-68P-201ENST00000615382 146 ntBASIC3.19□□□□□ -1.9
CDH1P12830 AC012314.7-201ENST00000619693 93 ntBASIC3.19□□□□□ -1.9
CDH1P12830 SNORD39.4-201ENST00000620099 78 ntBASIC3.19□□□□□ -1.9
CDH1P12830 U1.39-201ENST00000621562 146 ntBASIC3.19□□□□□ -1.9
CDH1P12830 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH1P12830 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH1P12830 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH1P12830 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH1P12830 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CDH1P12830 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH1P12830 RNU6-1284P-201ENST00000363701 100 ntBASIC3.18□□□□□ -1.9
CDH1P12830 RNA5SP189-201ENST00000364920 115 ntBASIC3.18□□□□□ -1.9
CDH1P12830 RNU5E-6P-201ENST00000365574 115 ntBASIC3.18□□□□□ -1.9
CDH1P12830 MIR23B-201ENST00000384832 97 ntBASIC3.18□□□□□ -1.9
CDH1P12830 SNORA48.8-201ENST00000391324 134 ntBASIC3.18□□□□□ -1.9
CDH1P12830 SNORA11-201ENST00000408789 128 ntBASIC3.18□□□□□ -1.9
CDH1P12830 RNU6-908P-201ENST00000410160 94 ntBASIC3.18□□□□□ -1.9
CDH1P12830 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH1P12830 MTCO3P12-201ENST00000416718 547 ntBASIC3.18□□□□□ -1.9
CDH1P12830 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH1P12830 MTCO1P39-201ENST00000426148 480 ntBASIC3.18□□□□□ -1.9
CDH1P12830 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH1P12830 AL606489.2-201ENST00000433886 234 ntBASIC3.18□□□□□ -1.9
CDH1P12830 HMGB1P31-201ENST00000437242 427 ntBASIC3.18□□□□□ -1.9
CDH1P12830 HMGB3P12-201ENST00000438745 556 ntBASIC3.18□□□□□ -1.9
CDH1P12830 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH1P12830 PRDX3P3-201ENST00000447765 522 ntBASIC3.18□□□□□ -1.9
CDH1P12830 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH1P12830 RPS29P25-201ENST00000481709 171 ntBASIC3.18□□□□□ -1.9
CDH1P12830 RPL36AP51-201ENST00000487216 318 ntBASIC3.18□□□□□ -1.9
CDH1P12830 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH1P12830 PRDX4P1-201ENST00000507189 574 ntBASIC3.18□□□□□ -1.9
CDH1P12830 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH1P12830 RNU6-1281P-201ENST00000516223 105 ntBASIC3.18□□□□□ -1.9
CDH1P12830 SNORD27.1-201ENST00000516319 72 ntBASIC3.18□□□□□ -1.9
CDH1P12830 RNU7-51P-201ENST00000516560 62 ntBASIC3.18□□□□□ -1.9
CDH1P12830 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH1P12830 HMGB1P41-201ENST00000520234 440 ntBASIC3.18□□□□□ -1.9
CDH1P12830 MTND1P35-201ENST00000526739 508 ntBASIC3.18□□□□□ -1.9
CDH1P12830 OR4R1P-201ENST00000529879 463 ntBASIC3.18□□□□□ -1.9
CDH1P12830 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDH1P12830 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH1P12830 MTCO3P24-201ENST00000572729 782 ntBASIC3.18□□□□□ -1.9
CDH1P12830 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
CDH1P12830 AC010928.3-201ENST00000587712 541 ntBASIC3.18□□□□□ -1.9
CDH1P12830 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH1P12830 AC004067.1-201ENST00000608733 700 ntBASIC3.18□□□□□ -1.9
CDH1P12830 uc_338.1-201ENST00000612113 180 ntBASIC3.18□□□□□ -1.9
CDH1P12830 SNHG22-203ENST00000617833 660 ntBASIC3.18□□□□□ -1.9
CDH1P12830 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CDH1P12830 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH1P12830 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH1P12830 Z83843.1-201ENST00000604070 3685 ntBASIC3.18□□□□□ -1.9
CDH1P12830 TAB3P1-202ENST00000452645 1634 ntBASIC3.18□□□□□ -1.9
CDH1P12830 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH1P12830 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH1P12830 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms