Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.91□□□□□ -1.94
KRT3P12035 AC119618.1-201ENST00000434191 222 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.91□□□□□ -1.94
KRT3P12035 TAAR7P-201ENST00000436141 242 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.91□□□□□ -1.94
KRT3P12035 GSTA11P-201ENST00000452866 669 ntBASIC2.91□□□□□ -1.94
KRT3P12035 snoU13.28-201ENST00000459235 104 ntBASIC2.91□□□□□ -1.94
KRT3P12035 RPS27AP9-201ENST00000477681 438 ntBASIC2.91□□□□□ -1.94
KRT3P12035 LARP1BP2-201ENST00000486594 519 ntBASIC2.91□□□□□ -1.94
KRT3P12035 HIGD1AP13-201ENST00000509878 289 ntBASIC2.91□□□□□ -1.94
KRT3P12035 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.91□□□□□ -1.94
KRT3P12035 AC060788.1-201ENST00000521318 469 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AP003181.2-201ENST00000528941 181 ntBASIC2.91□□□□□ -1.94
KRT3P12035 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.91□□□□□ -1.94
KRT3P12035 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.91□□□□□ -1.94
KRT3P12035 AC012065.4-201ENST00000602445 679 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AL359999.1-201ENST00000604513 294 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AP000860.1-201ENST00000605250 559 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AC239868.4-201ENST00000608318 671 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AC013476.2-201ENST00000614456 459 ntBASIC2.91□□□□□ -1.94
KRT3P12035 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.91□□□□□ -1.94
KRT3P12035 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
KRT3P12035 SDAD1P2-201ENST00000441308 2028 ntBASIC2.91□□□□□ -1.94
KRT3P12035 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.91□□□□□ -1.94
KRT3P12035 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
KRT3P12035 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.91□□□□□ -1.94
KRT3P12035 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.9□□□□□ -1.94
KRT3P12035 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KRT3P12035 AC138915.1-201ENST00000565427 1685 ntBASIC2.9□□□□□ -1.95
KRT3P12035 SNORA9-201ENST00000384215 133 ntBASIC2.9□□□□□ -1.95
KRT3P12035 MIR128-1-201ENST00000384921 82 ntBASIC2.9□□□□□ -1.95
KRT3P12035 SNORA48.2-201ENST00000390926 124 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AL512633.1-201ENST00000399931 655 ntBASIC2.9□□□□□ -1.95
KRT3P12035 RNU2-62P-201ENST00000410868 191 ntBASIC2.9□□□□□ -1.95
KRT3P12035 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.9□□□□□ -1.95
KRT3P12035 AL513477.1-202ENST00000417061 214 ntBASIC2.9□□□□□ -1.95
KRT3P12035 NPM1P11-201ENST00000417106 855 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC006366.1-201ENST00000422002 759 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.9□□□□□ -1.95
KRT3P12035 FCF1P1-201ENST00000432690 571 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.9□□□□□ -1.95
KRT3P12035 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.9□□□□□ -1.95
KRT3P12035 AC005094.1-201ENST00000440420 368 ntBASIC2.9□□□□□ -1.95
KRT3P12035 USP9YP15-201ENST00000442391 422 ntBASIC2.9□□□□□ -1.95
KRT3P12035 MTATP6P30-201ENST00000443540 664 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.9□□□□□ -1.95
KRT3P12035 SNRPGP9-201ENST00000456025 225 ntBASIC2.9□□□□□ -1.95
KRT3P12035 RPL37P6-201ENST00000460682 294 ntBASIC2.9□□□□□ -1.95
KRT3P12035 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.9□□□□□ -1.95
KRT3P12035 AC091965.2-201ENST00000512324 613 ntBASIC2.9□□□□□ -1.95
KRT3P12035 SNORA74D-201ENST00000516404 141 ntBASIC2.9□□□□□ -1.95
KRT3P12035 NRON-201ENST00000517270 370 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.9□□□□□ -1.95
KRT3P12035 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
KRT3P12035 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.9□□□□□ -1.95
KRT3P12035 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.9□□□□□ -1.95
KRT3P12035 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.9□□□□□ -1.95
KRT3P12035 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.9□□□□□ -1.95
KRT3P12035 CYCSP39-201ENST00000565821 309 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.9□□□□□ -1.95
KRT3P12035 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.9□□□□□ -1.95
KRT3P12035 RPL23AP78-201ENST00000599928 470 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC112191.3-201ENST00000604371 277 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AL161756.2-201ENST00000604597 246 ntBASIC2.9□□□□□ -1.95
KRT3P12035 BX664608.1-201ENST00000610519 487 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC008250.2-201ENST00000615261 205 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC073308.1-201ENST00000623696 305 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC025048.6-202ENST00000627667 438 ntBASIC2.9□□□□□ -1.95
KRT3P12035 AC110079.1-202ENST00000635213 138 ntBASIC2.9□□□□□ -1.95
KRT3P12035 MIR3974-201ENST00000637126 96 ntBASIC2.9□□□□□ -1.95
KRT3P12035 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
KRT3P12035 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KRT3P12035 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRT3P12035 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
KRT3P12035 MTND4P4-201ENST00000439033 1366 ntBASIC2.89□□□□□ -1.95
KRT3P12035 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
KRT3P12035 AC099654.7-201ENST00000635788 2127 ntBASIC2.89□□□□□ -1.95
KRT3P12035 RNY3P10-201ENST00000384764 102 ntBASIC2.89□□□□□ -1.95
KRT3P12035 Y_RNA.598-201ENST00000410480 95 ntBASIC2.89□□□□□ -1.95
KRT3P12035 Y_RNA.608-201ENST00000410647 95 ntBASIC2.89□□□□□ -1.95
KRT3P12035 AL513331.1-201ENST00000411908 397 ntBASIC2.89□□□□□ -1.95
KRT3P12035 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT3P12035 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.89□□□□□ -1.95
KRT3P12035 AL353777.1-201ENST00000425552 326 ntBASIC2.89□□□□□ -1.95
KRT3P12035 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT3P12035 AL135938.1-201ENST00000443141 297 ntBASIC2.89□□□□□ -1.95
KRT3P12035 CBWD4P-201ENST00000445695 655 ntBASIC2.89□□□□□ -1.95
KRT3P12035 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT3P12035 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT3P12035 RPS27AP8-201ENST00000452665 445 ntBASIC2.89□□□□□ -1.95
KRT3P12035 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT3P12035 MTND4LP3-201ENST00000468320 276 ntBASIC2.89□□□□□ -1.95
KRT3P12035 RPL23AP11-201ENST00000475260 469 ntBASIC2.89□□□□□ -1.95
KRT3P12035 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT3P12035 MTND5P13-201ENST00000513046 1079 ntBASIC2.89□□□□□ -1.95
KRT3P12035 RNU6-201P-201ENST00000517100 61 ntBASIC2.89□□□□□ -1.95
KRT3P12035 AC107934.1-201ENST00000522215 217 ntBASIC2.89□□□□□ -1.95
KRT3P12035 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms