Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-534P-201ENST00000364877 106 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 U8.14-201ENST00000390843 143 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 AL590290.1-201ENST00000405336 380 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 FAT1P1-201ENST00000406588 507 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 RPS3AP3-201ENST00000411933 242 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 OR51A3P-201ENST00000413596 924 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 RPS3AP9-201ENST00000417027 792 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 RPL21P111-201ENST00000418453 477 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.05□□□□□ -1.92
COL2A1P02458 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.05□□□□□ -1.92
COL2A1P02458 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.05□□□□□ -1.92
COL2A1P02458 CACYBPP1-201ENST00000438592 684 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.05□□□□□ -1.92
COL2A1P02458 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.05□□□□□ -1.92
COL2A1P02458 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.05□□□□□ -1.92
COL2A1P02458 AL162388.1-201ENST00000450912 352 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 CACYBPP2-201ENST00000453625 678 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 OR6K1P-201ENST00000456766 971 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 snoU109.1-201ENST00000459339 135 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
COL2A1P02458 AC108078.1-201ENST00000508073 725 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.05□□□□□ -1.92
COL2A1P02458 AC024589.1-201ENST00000512207 263 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 ARL2BPP5-201ENST00000523141 481 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.05□□□□□ -1.92
COL2A1P02458 HIF1AP1-201ENST00000553642 175 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.05□□□□□ -1.92
COL2A1P02458 MTCO3P13-201ENST00000577757 781 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 MIR4637-201ENST00000582405 84 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 AC097468.3-201ENST00000607956 456 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.05□□□□□ -1.92
COL2A1P02458 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.05□□□□□ -1.92
COL2A1P02458 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL2A1P02458 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.05□□□□□ -1.92
COL2A1P02458 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL2A1P02458 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL2A1P02458 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.05□□□□□ -1.92
COL2A1P02458 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL2A1P02458 RPL9P7-201ENST00000330965 580 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 RNA5SP99-201ENST00000364020 114 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 RNU6-777P-201ENST00000364265 104 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
COL2A1P02458 Y_RNA.394-201ENST00000383942 103 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.04□□□□□ -1.92
COL2A1P02458 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.04□□□□□ -1.92
COL2A1P02458 HMGN2P3-201ENST00000433603 273 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.04□□□□□ -1.92
COL2A1P02458 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.04□□□□□ -1.92
COL2A1P02458 UBE2FP3-201ENST00000436366 524 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 HMGN2P5-201ENST00000436882 273 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 ARPC3P1-201ENST00000437218 533 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 BX248409.1-201ENST00000455497 255 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 MTND1P3-201ENST00000484956 952 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL2A1P02458 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL2A1P02458 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL2A1P02458 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.04□□□□□ -1.92
COL2A1P02458 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL2A1P02458 RNU6-150P-201ENST00000516237 95 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AC100870.1-201ENST00000522035 505 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AC125611.2-201ENST00000551907 647 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AL512360.1-201ENST00000555346 234 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 MIR4648-201ENST00000580107 72 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.04□□□□□ -1.92
COL2A1P02458 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.04□□□□□ -1.92
COL2A1P02458 AL596327.1-201ENST00000603629 213 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AL590282.1-201ENST00000610379 1136 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.04□□□□□ -1.92
COL2A1P02458 AL359880.1-201ENST00000621879 266 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.04□□□□□ -1.92
COL2A1P02458 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
COL2A1P02458 AC090229.1-201ENST00000590983 1609 ntBASIC3.04□□□□□ -1.92
COL2A1P02458 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.04□□□□□ -1.92
COL2A1P02458 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL2A1P02458 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
COL2A1P02458 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
COL2A1P02458 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL2A1P02458 RNA5SP289-201ENST00000362332 137 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 RNU6-289P-201ENST00000364093 107 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 Y_RNA.226-201ENST00000364337 114 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.03□□□□□ -1.92
COL2A1P02458 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.03□□□□□ -1.92
COL2A1P02458 RNU6-877P-201ENST00000383868 107 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 RNU6-533P-201ENST00000384144 107 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 SNORD116-23-201ENST00000384645 92 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL2A1P02458 AL356776.1-201ENST00000406574 447 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AL450338.1-201ENST00000407987 512 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 USP9YP20-201ENST00000419224 558 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC012498.1-201ENST00000424037 437 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.03□□□□□ -1.92
COL2A1P02458 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.03□□□□□ -1.92
COL2A1P02458 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.03□□□□□ -1.92
COL2A1P02458 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.03□□□□□ -1.92
COL2A1P02458 RPL18AP17-201ENST00000455326 198 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC092757.1-201ENST00000467293 467 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 RNA5SP458-201ENST00000516188 119 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 RPL7P20-201ENST00000520308 745 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms