Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC021755.4-201ENST00000616620 456 ntBASIC1.26□□□□□ -2.21
TNFP01375 AC068620.4-201ENST00000636730 1182 ntBASIC1.26□□□□□ -2.21
TNFP01375 OR5H6-203ENST00000642105 978 ntBASIC1.26□□□□□ -2.21
TNFP01375 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TNFP01375 AC233981.2-201ENST00000611524 1614 ntBASIC1.26□□□□□ -2.21
TNFP01375 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
TNFP01375 AC111188.2-201ENST00000529697 1387 ntBASIC1.25□□□□□ -2.21
TNFP01375 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TNFP01375 OR1L1-202ENST00000373686 1083 ntBASIC1.25□□□□□ -2.21
TNFP01375 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
TNFP01375 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.25□□□□□ -2.21
TNFP01375 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.25□□□□□ -2.21
TNFP01375 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.25□□□□□ -2.21
TNFP01375 TAF9P1-201ENST00000445421 515 ntBASIC1.25□□□□□ -2.21
TNFP01375 TAF9P2-201ENST00000454958 515 ntBASIC1.25□□□□□ -2.21
TNFP01375 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.25□□□□□ -2.21
TNFP01375 AC104164.3-201ENST00000467363 1258 ntBASIC1.25□□□□□ -2.21
TNFP01375 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
TNFP01375 RPL36AP21-201ENST00000490372 323 ntBASIC1.25□□□□□ -2.21
TNFP01375 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.25□□□□□ -2.21
TNFP01375 MIR892C-201ENST00000516410 77 ntBASIC1.25□□□□□ -2.21
TNFP01375 RNA5SP61-201ENST00000516453 100 ntBASIC1.25□□□□□ -2.21
TNFP01375 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.25□□□□□ -2.21
TNFP01375 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.25□□□□□ -2.21
TNFP01375 AP005597.4-201ENST00000526762 229 ntBASIC1.25□□□□□ -2.21
TNFP01375 AP002748.2-201ENST00000528671 348 ntBASIC1.25□□□□□ -2.21
TNFP01375 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.25□□□□□ -2.21
TNFP01375 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.25□□□□□ -2.21
TNFP01375 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.25□□□□□ -2.21
TNFP01375 CBX3P2-202ENST00000583365 535 ntBASIC1.25□□□□□ -2.21
TNFP01375 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.25□□□□□ -2.21
TNFP01375 BNIP3P8-201ENST00000597863 560 ntBASIC1.25□□□□□ -2.21
TNFP01375 AC073413.2-201ENST00000604332 360 ntBASIC1.25□□□□□ -2.21
TNFP01375 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TNFP01375 AC093838.1-201ENST00000613014 469 ntBASIC1.25□□□□□ -2.21
TNFP01375 AL773524.1-201ENST00000614065 229 ntBASIC1.25□□□□□ -2.21
TNFP01375 AC040168.1-201ENST00000623594 991 ntBASIC1.25□□□□□ -2.21
TNFP01375 AC068057.2-201ENST00000624047 895 ntBASIC1.25□□□□□ -2.21
TNFP01375 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
TNFP01375 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.24□□□□□ -2.21
TNFP01375 SNORA51.12-201ENST00000384448 134 ntBASIC1.24□□□□□ -2.21
TNFP01375 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TNFP01375 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TNFP01375 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.24□□□□□ -2.21
TNFP01375 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.24□□□□□ -2.21
TNFP01375 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.24□□□□□ -2.21
TNFP01375 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.24□□□□□ -2.21
TNFP01375 AC021146.2-201ENST00000504736 556 ntBASIC1.24□□□□□ -2.21
TNFP01375 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TNFP01375 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.24□□□□□ -2.21
TNFP01375 AL359273.1-201ENST00000510918 627 ntBASIC1.24□□□□□ -2.21
TNFP01375 AC022447.1-201ENST00000515358 464 ntBASIC1.24□□□□□ -2.21
TNFP01375 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.24□□□□□ -2.21
TNFP01375 AL133241.1-201ENST00000556832 487 ntBASIC1.24□□□□□ -2.21
TNFP01375 AC055876.5-201ENST00000605667 259 ntBASIC1.24□□□□□ -2.21
TNFP01375 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.24□□□□□ -2.21
TNFP01375 AP002791.1-201ENST00000623291 381 ntBASIC1.24□□□□□ -2.21
TNFP01375 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.24□□□□□ -2.21
TNFP01375 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TNFP01375 RNU1-62P-201ENST00000362599 164 ntBASIC1.23□□□□□ -2.21
TNFP01375 Y_RNA.226-201ENST00000364337 114 ntBASIC1.23□□□□□ -2.21
TNFP01375 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TNFP01375 MIR218-1-201ENST00000384999 110 ntBASIC1.23□□□□□ -2.21
TNFP01375 RNU6-955P-201ENST00000410497 104 ntBASIC1.23□□□□□ -2.21
TNFP01375 AL158823.1-201ENST00000418441 478 ntBASIC1.23□□□□□ -2.21
TNFP01375 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.23□□□□□ -2.21
TNFP01375 HMGB1P9-201ENST00000429856 646 ntBASIC1.23□□□□□ -2.21
TNFP01375 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
TNFP01375 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.23□□□□□ -2.21
TNFP01375 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.23□□□□□ -2.21
TNFP01375 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.23□□□□□ -2.21
TNFP01375 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.23□□□□□ -2.21
TNFP01375 MIR3126-201ENST00000577443 74 ntBASIC1.23□□□□□ -2.21
TNFP01375 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.23□□□□□ -2.21
TNFP01375 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.23□□□□□ -2.21
TNFP01375 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.23□□□□□ -2.21
TNFP01375 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
TNFP01375 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.22□□□□□ -2.21
TNFP01375 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TNFP01375 RNU6-707P-201ENST00000364647 95 ntBASIC1.22□□□□□ -2.21
TNFP01375 RNU6-53P-201ENST00000365367 106 ntBASIC1.22□□□□□ -2.21
TNFP01375 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
TNFP01375 MIR1287-201ENST00000408492 90 ntBASIC1.22□□□□□ -2.21
TNFP01375 RPS12P24-201ENST00000412619 387 ntBASIC1.22□□□□□ -2.21
TNFP01375 AL133384.1-201ENST00000412744 351 ntBASIC1.22□□□□□ -2.21
TNFP01375 AC074117.2-201ENST00000417130 397 ntBASIC1.22□□□□□ -2.21
TNFP01375 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.22□□□□□ -2.21
TNFP01375 AC244636.1-201ENST00000421152 228 ntBASIC1.22□□□□□ -2.21
TNFP01375 MTND4LP10-201ENST00000435146 291 ntBASIC1.22□□□□□ -2.21
TNFP01375 Z73417.1-201ENST00000447373 778 ntBASIC1.22□□□□□ -2.21
TNFP01375 AC114982.2-201ENST00000461396 358 ntBASIC1.22□□□□□ -2.21
TNFP01375 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.22□□□□□ -2.21
TNFP01375 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TNFP01375 AC008526.1-201ENST00000509149 338 ntBASIC1.22□□□□□ -2.21
TNFP01375 AP004607.1-201ENST00000524456 203 ntBASIC1.22□□□□□ -2.21
TNFP01375 ARL2BPP2-201ENST00000550907 489 ntBASIC1.22□□□□□ -2.21
TNFP01375 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.22□□□□□ -2.21
TNFP01375 AL021997.1-201ENST00000605757 193 ntBASIC1.22□□□□□ -2.21
TNFP01375 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.22□□□□□ -2.21
TNFP01375 AC025263.3-201ENST00000622965 1396 ntBASIC1.21□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms