Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TAB3P1-202ENST00000452645 1634 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDLRP01130 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.29□□□□□ -1.88
LDLRP01130 AF117829.1-206ENST00000621883 3802 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC004944.1-201ENST00000517807 3059 ntBASIC3.28□□□□□ -1.88
LDLRP01130 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDLRP01130 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LDLRP01130 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.28□□□□□ -1.88
LDLRP01130 Y_RNA.38-201ENST00000362617 102 ntBASIC3.28□□□□□ -1.88
LDLRP01130 RNU6-181P-201ENST00000363225 107 ntBASIC3.28□□□□□ -1.88
LDLRP01130 SNORD56.3-201ENST00000363507 71 ntBASIC3.28□□□□□ -1.88
LDLRP01130 RNY4P14-201ENST00000363656 96 ntBASIC3.28□□□□□ -1.88
LDLRP01130 RNU6-278P-201ENST00000390945 109 ntBASIC3.28□□□□□ -1.88
LDLRP01130 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDLRP01130 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDLRP01130 RPS15AP12-201ENST00000419498 388 ntBASIC3.28□□□□□ -1.88
LDLRP01130 MTND1P14-201ENST00000427400 950 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC073464.1-201ENST00000429823 534 ntBASIC3.28□□□□□ -1.88
LDLRP01130 TIMM9P1-201ENST00000436122 256 ntBASIC3.28□□□□□ -1.88
LDLRP01130 RPL35AP22-201ENST00000436855 335 ntBASIC3.28□□□□□ -1.88
LDLRP01130 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDLRP01130 AC073614.1-201ENST00000438690 650 ntBASIC3.28□□□□□ -1.88
LDLRP01130 DPPA3P1-201ENST00000448050 469 ntBASIC3.28□□□□□ -1.88
LDLRP01130 MTND3P10-201ENST00000450967 341 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC008628.2-201ENST00000502605 298 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC019235.1-201ENST00000503847 207 ntBASIC3.28□□□□□ -1.88
LDLRP01130 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.28□□□□□ -1.88
LDLRP01130 AC114967.1-201ENST00000504890 259 ntBASIC3.28□□□□□ -1.88
LDLRP01130 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.28□□□□□ -1.88
LDLRP01130 AC108078.1-201ENST00000508073 725 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC010265.1-201ENST00000513509 211 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC114797.1-201ENST00000514003 728 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.28□□□□□ -1.88
LDLRP01130 RNA5SP468-201ENST00000516782 93 ntBASIC3.28□□□□□ -1.88
LDLRP01130 RNU6-430P-201ENST00000517078 107 ntBASIC3.28□□□□□ -1.88
LDLRP01130 RANP9-201ENST00000519957 271 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.28□□□□□ -1.88
LDLRP01130 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.28□□□□□ -1.88
LDLRP01130 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.28□□□□□ -1.88
LDLRP01130 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
LDLRP01130 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.28□□□□□ -1.88
LDLRP01130 Y_RNA.804-201ENST00000615262 101 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AP001506.1-201ENST00000615444 211 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.28□□□□□ -1.88
LDLRP01130 AC136475.10-201ENST00000620253 385 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AP003355.3-201ENST00000623465 114 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AL136313.1-201ENST00000624804 202 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AC099654.5-201ENST00000636479 350 ntBASIC3.28□□□□□ -1.88
LDLRP01130 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.28□□□□□ -1.88
LDLRP01130 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDLRP01130 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LDLRP01130 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LDLRP01130 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
LDLRP01130 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
LDLRP01130 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
LDLRP01130 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LDLRP01130 Y_RNA.9-201ENST00000362354 101 ntBASIC3.27□□□□□ -1.89
LDLRP01130 RNU6-1090P-201ENST00000364065 94 ntBASIC3.27□□□□□ -1.89
LDLRP01130 RNU5A-8P-201ENST00000364102 114 ntBASIC3.27□□□□□ -1.89
LDLRP01130 Y_RNA.453-201ENST00000384223 109 ntBASIC3.27□□□□□ -1.89
LDLRP01130 MT-TL1-201ENST00000386347 75 ntBASIC3.27□□□□□ -1.89
LDLRP01130 RNU6-754P-201ENST00000391166 107 ntBASIC3.27□□□□□ -1.89
LDLRP01130 UBA52P6-201ENST00000399822 382 ntBASIC3.27□□□□□ -1.89
LDLRP01130 RNU4-65P-201ENST00000410473 140 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AC017079.2-201ENST00000416102 485 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.27□□□□□ -1.89
LDLRP01130 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.27□□□□□ -1.89
LDLRP01130 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.27□□□□□ -1.89
LDLRP01130 AC019097.1-201ENST00000424783 735 ntBASIC3.27□□□□□ -1.89
LDLRP01130 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 ISCA1P6-201ENST00000427740 390 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.27□□□□□ -1.89
LDLRP01130 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 USP9YP8-201ENST00000441913 500 ntBASIC3.27□□□□□ -1.89
LDLRP01130 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.27□□□□□ -1.89
LDLRP01130 GAPDHP17-201ENST00000449858 1001 ntBASIC3.27□□□□□ -1.89
LDLRP01130 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.27□□□□□ -1.89
LDLRP01130 RNU7-59P-201ENST00000459101 61 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.27□□□□□ -1.89
LDLRP01130 MTCYBP18-201ENST00000501056 747 ntBASIC3.27□□□□□ -1.89
LDLRP01130 KCTD9P5-201ENST00000504141 1170 ntBASIC3.27□□□□□ -1.89
LDLRP01130 ARL4AP2-201ENST00000507378 601 ntBASIC3.27□□□□□ -1.89
LDLRP01130 PHBP14-201ENST00000512887 367 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.27□□□□□ -1.89
LDLRP01130 RNU1-61P-201ENST00000516107 151 ntBASIC3.27□□□□□ -1.89
LDLRP01130 Y_RNA.672-201ENST00000516289 104 ntBASIC3.27□□□□□ -1.89
LDLRP01130 RNU6-875P-201ENST00000516488 106 ntBASIC3.27□□□□□ -1.89
LDLRP01130 SNORA18.6-201ENST00000516792 115 ntBASIC3.27□□□□□ -1.89
LDLRP01130 RNU2-46P-201ENST00000517038 113 ntBASIC3.27□□□□□ -1.89
LDLRP01130 MTCO2P4-201ENST00000517968 247 ntBASIC3.27□□□□□ -1.89
LDLRP01130 OR5AQ1P-201ENST00000527596 927 ntBASIC3.27□□□□□ -1.89
LDLRP01130 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms