Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ALDH1A1P00352 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ALDH1A1P00352 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ALDH1A1P00352 AC109446.4-201ENST00000623235 2755 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ALDH1A1P00352 UBE2WP1-201ENST00000362030 340 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 RNU6-1325P-201ENST00000364905 105 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 Y_RNA.405-201ENST00000383979 100 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 Y_RNA.451-201ENST00000384200 100 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 Y_RNA.524-201ENST00000384564 100 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 Y_RNA.561-201ENST00000384694 100 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 TBCAP2-201ENST00000416175 326 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 AC099677.1-201ENST00000420575 175 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 AL358453.1-201ENST00000422522 250 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 RPL30P3-201ENST00000424262 333 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 EEF1A1P1-201ENST00000447052 739 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 AC022431.1-201ENST00000450941 438 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 RPL23AP24-201ENST00000458203 385 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 SNORD2.1-201ENST00000458762 69 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 RPL23AP2-201ENST00000471227 466 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 RNU6-914P-201ENST00000516749 109 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 IGLVIV-53-201ENST00000520107 367 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 AC034105.4-201ENST00000568304 277 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 SNORD113-5-201ENST00000607261 78 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 AC084757.4-201ENST00000616350 526 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 MIR6839-201ENST00000620425 113 ntBASIC5.59□□□□□ -1.51
ALDH1A1P00352 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.59□□□□□ -1.51
ALDH1A1P00352 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ALDH1A1P00352 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ALDH1A1P00352 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
ALDH1A1P00352 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.59□□□□□ -1.52
ALDH1A1P00352 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
ALDH1A1P00352 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 MAPK10-328ENST00000641553 4009 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
ALDH1A1P00352 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.58□□□□□ -1.52
ALDH1A1P00352 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 AC007685.1-201ENST00000329806 452 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 RNU6-249P-201ENST00000363016 102 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 Y_RNA.308-201ENST00000365043 101 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 Y_RNA.569-201ENST00000384749 103 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 RN7SKP267-201ENST00000410381 285 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 RPS12P10-201ENST00000427031 377 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 SNORA84-201ENST00000459229 133 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 U8.21-201ENST00000459536 136 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 RN7SL303P-201ENST00000469773 251 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 ANXA2P1-201ENST00000505539 926 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 HMGN1P11-201ENST00000508668 303 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.58□□□□□ -1.52
ALDH1A1P00352 MIR3138-201ENST00000585238 82 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.58□□□□□ -1.52
ALDH1A1P00352 AL359881.1-201ENST00000602916 267 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 AC009314.1-201ENST00000603871 304 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 MIR4679-1-201ENST00000637619 75 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 MUC2-202ENST00000613187 4845 ntBASIC5.58□□□□□ -1.52
ALDH1A1P00352 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.58□□□□□ -1.52
ALDH1A1P00352 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ALDH1A1P00352 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
ALDH1A1P00352 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ALDH1A1P00352 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.57□□□□□ -1.52
ALDH1A1P00352 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ALDH1A1P00352 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ALDH1A1P00352 ZNF826P-207ENST00000622273 1910 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ALDH1A1P00352 SNORA48.4-201ENST00000391089 134 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 RPS26P8-201ENST00000393490 348 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 RPL31P2-201ENST00000413849 377 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 AL451062.2-201ENST00000427515 271 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.57□□□□□ -1.52
ALDH1A1P00352 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.57□□□□□ -1.52
ALDH1A1P00352 TDGF1P1-201ENST00000445734 527 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 HIGD1AP2-201ENST00000446367 280 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ALDH1A1P00352 snoU109.4-201ENST00000458953 143 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.57□□□□□ -1.52
ALDH1A1P00352 AC020593.1-201ENST00000507399 299 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 RN7SKP258-201ENST00000517151 304 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 AC103783.1-201ENST00000520506 373 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 AC233702.2-202ENST00000562547 291 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ALDH1A1P00352 RMST_4.1-201ENST00000616886 107 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 MIR6130-201ENST00000619419 109 ntBASIC5.57□□□□□ -1.52
ALDH1A1P00352 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ALDH1A1P00352 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms