Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN9O95484 NRBF2P5-201ENST00000603087 788 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 RPP40P2-201ENST00000603596 712 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC007038.2-201ENST00000608095 740 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC245517.5-201ENST00000611529 162 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC013562.2-201ENST00000611632 603 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 SCARNA17.4-201ENST00000614296 143 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC034102.8-201ENST00000615146 484 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC140725.3-201ENST00000616193 880 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN9O95484 U4.3-201ENST00000621047 82 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN9O95484 AC097655.1-201ENST00000635075 318 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN9O95484 AC092125.1-201ENST00000562568 1995 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN9O95484 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN9O95484 MTND5P33-201ENST00000571250 1450 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN9O95484 PABPC1P9-201ENST00000426076 1612 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CLDN9O95484 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.38□□□□□ -2.03
CLDN9O95484 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN9O95484 RNU6-723P-201ENST00000383973 107 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 MIR196B-201ENST00000384852 84 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 MIR19A-201ENST00000384878 82 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 PIGPP2-201ENST00000411569 458 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN9O95484 USP9YP13-201ENST00000417797 480 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 USP9YP26-201ENST00000421008 661 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN9O95484 AL445669.1-201ENST00000426743 755 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 AC004854.1-201ENST00000440356 349 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC013267.1-201ENST00000458227 267 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC107626.1-201ENST00000471084 183 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 AP000852.1-201ENST00000472460 573 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 RN7SL432P-201ENST00000484057 298 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN9O95484 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN9O95484 RNU6-927P-201ENST00000516199 100 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 RNA5SP471-201ENST00000516971 106 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 UBTFL10-201ENST00000528532 562 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN9O95484 AL359212.1-201ENST00000556608 614 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 MIR3117-201ENST00000584034 78 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC004805.2-201ENST00000605382 482 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 AC097468.3-201ENST00000607956 456 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 AC072039.2-201ENST00000608883 439 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN9O95484 AC010297.1-201ENST00000623948 149 ntBASIC2.38□□□□□ -2.03
CLDN9O95484 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
CLDN9O95484 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN9O95484 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN9O95484 AC106754.1-201ENST00000562632 1513 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLDN9O95484 AC062016.1-201ENST00000355719 319 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 RN7SKP226-201ENST00000364912 300 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 RNU1-138P-201ENST00000384093 164 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC119751.3-201ENST00000399720 670 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 RNA5SP184-201ENST00000411071 108 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 HMGB1P49-201ENST00000418882 569 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AL035407.1-201ENST00000429211 571 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC244035.1-201ENST00000430042 390 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC084290.1-201ENST00000434995 374 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN9O95484 AL513124.1-201ENST00000450410 614 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 CECR9-201ENST00000453421 199 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN9O95484 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN9O95484 RNU7-59P-201ENST00000459101 61 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN9O95484 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 MTCO2P15-201ENST00000532655 656 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN9O95484 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN9O95484 AC093012.1-202ENST00000549403 582 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN9O95484 MIR3162-201ENST00000581818 82 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 MTCO2P2-201ENST00000591258 225 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN9O95484 BNIP3P23-201ENST00000599655 511 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC009974.1-201ENST00000608881 455 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN9O95484 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.37□□□□□ -2.03
CLDN9O95484 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CLDN9O95484 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CLDN9O95484 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN9O95484 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN9O95484 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN9O95484 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms