Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FCF1P8-201ENST00000510322 597 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 RNU6-928P-201ENST00000516876 104 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 RNU6-685P-201ENST00000517088 95 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-2O95096 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-2O95096 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-2O95096 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.15□□□□□ -1.91
NKX2-2O95096 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-2O95096 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.15□□□□□ -1.91
NKX2-2O95096 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-2O95096 MIR3922-201ENST00000585192 84 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.15□□□□□ -1.91
NKX2-2O95096 AC012507.3-201ENST00000603556 477 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 BNIP3P9-201ENST00000603714 553 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 SNORA51-201ENST00000606420 132 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AP001330.5-201ENST00000607176 411 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-2O95096 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-2O95096 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-2O95096 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.15□□□□□ -1.91
NKX2-2O95096 AC010680.1-201ENST00000590024 3590 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
NKX2-2O95096 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-2O95096 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-2O95096 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-2O95096 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-2O95096 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-2O95096 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
NKX2-2O95096 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NKX2-2O95096 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 SNORA62.1-201ENST00000364287 154 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NKX2-2O95096 RNU2-9P-201ENST00000410194 145 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-2O95096 AC069157.1-201ENST00000421749 137 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.14□□□□□ -1.91
NKX2-2O95096 AC092017.2-201ENST00000427600 362 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-2O95096 AL592045.1-201ENST00000429867 352 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 GOT2P5-201ENST00000433995 546 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 SNRPEP9-201ENST00000436794 238 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-2O95096 AC093392.2-201ENST00000450682 337 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 FABP5P13-201ENST00000452144 328 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 CECR9-201ENST00000453421 199 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AC010099.1-201ENST00000455434 375 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-2O95096 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-2O95096 ARL4AP2-201ENST00000507378 601 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AC110768.1-201ENST00000509222 400 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 RNU6-914P-201ENST00000516749 109 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 OR5AL2P-201ENST00000532185 920 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 ADI1P3-201ENST00000549509 470 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-2O95096 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-2O95096 AC008521.1-201ENST00000587471 187 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AL021997.1-201ENST00000605757 193 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AC068792.1-201ENST00000621354 417 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 AL157786.1-207ENST00000627771 695 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 SEPT14P19-203ENST00000633205 211 ntBASIC3.14□□□□□ -1.91
NKX2-2O95096 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-2O95096 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-2O95096 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-2O95096 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-2O95096 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AP002088.1-201ENST00000382740 395 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 Y_RNA.576-201ENST00000384781 102 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 RNU6-328P-201ENST00000390887 106 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 CALM2P3-201ENST00000400429 449 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 RN7SKP285-201ENST00000410137 318 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AF274854.1-201ENST00000413236 615 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 UBE2V1P10-201ENST00000414685 269 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AL356968.1-201ENST00000416622 474 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 MTCO1P21-201ENST00000416634 589 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 MTCYBP5-201ENST00000423752 1135 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 CALM2P2-201ENST00000428512 440 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 HMGN2P31-201ENST00000432430 273 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AC004801.2-202ENST00000463559 283 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-2O95096 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AC019235.1-201ENST00000503847 207 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AC109927.2-201ENST00000506416 303 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms