Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.14□□□□□ -2.07
PCF11O94913 MORF4L1P7-201ENST00000426038 703 ntBASIC2.14□□□□□ -2.07
PCF11O94913 FABP5P3-201ENST00000437960 408 ntBASIC2.14□□□□□ -2.07
PCF11O94913 snoU13.28-201ENST00000459235 104 ntBASIC2.14□□□□□ -2.07
PCF11O94913 VPS26AP1-201ENST00000483197 979 ntBASIC2.14□□□□□ -2.07
PCF11O94913 AC114322.1-201ENST00000506771 926 ntBASIC2.14□□□□□ -2.07
PCF11O94913 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PCF11O94913 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.14□□□□□ -2.07
PCF11O94913 LSM6P2-201ENST00000552208 177 ntBASIC2.14□□□□□ -2.07
PCF11O94913 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.14□□□□□ -2.07
PCF11O94913 MIR3117-201ENST00000584034 78 ntBASIC2.14□□□□□ -2.07
PCF11O94913 AC097504.2-201ENST00000608088 454 ntBASIC2.14□□□□□ -2.07
PCF11O94913 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
PCF11O94913 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.13□□□□□ -2.07
PCF11O94913 AL121871.1-201ENST00000443413 436 ntBASIC2.13□□□□□ -2.07
PCF11O94913 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.13□□□□□ -2.07
PCF11O94913 RPS15AP27-201ENST00000449183 343 ntBASIC2.13□□□□□ -2.07
PCF11O94913 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.13□□□□□ -2.07
PCF11O94913 SNRPFP3-201ENST00000457792 225 ntBASIC2.13□□□□□ -2.07
PCF11O94913 RPL23AP41-201ENST00000484754 458 ntBASIC2.13□□□□□ -2.07
PCF11O94913 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.13□□□□□ -2.07
PCF11O94913 HMGB3P3-201ENST00000510526 400 ntBASIC2.13□□□□□ -2.07
PCF11O94913 HIGD1AP6-201ENST00000521833 279 ntBASIC2.13□□□□□ -2.07
PCF11O94913 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.13□□□□□ -2.07
PCF11O94913 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.13□□□□□ -2.07
PCF11O94913 MIR3616-201ENST00000584070 92 ntBASIC2.13□□□□□ -2.07
PCF11O94913 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.13□□□□□ -2.07
PCF11O94913 AC098657.3-201ENST00000620434 263 ntBASIC2.13□□□□□ -2.07
PCF11O94913 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.13□□□□□ -2.07
PCF11O94913 AP000560.1-201ENST00000624150 1937 ntBASIC2.13□□□□□ -2.07
PCF11O94913 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCF11O94913 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
PCF11O94913 SNORA38-201ENST00000363946 132 ntBASIC2.12□□□□□ -2.07
PCF11O94913 SNORA68.1-201ENST00000364537 132 ntBASIC2.12□□□□□ -2.07
PCF11O94913 RNU1-133P-201ENST00000364867 167 ntBASIC2.12□□□□□ -2.07
PCF11O94913 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
PCF11O94913 AC079780.1-201ENST00000428259 207 ntBASIC2.12□□□□□ -2.07
PCF11O94913 UBE2V1P13-201ENST00000436983 439 ntBASIC2.12□□□□□ -2.07
PCF11O94913 AC104073.1-201ENST00000451988 151 ntBASIC2.12□□□□□ -2.07
PCF11O94913 PNPLA4P1-201ENST00000458328 305 ntBASIC2.12□□□□□ -2.07
PCF11O94913 AC015724.1-201ENST00000478577 156 ntBASIC2.12□□□□□ -2.07
PCF11O94913 AL135752.1-201ENST00000479477 471 ntBASIC2.12□□□□□ -2.07
PCF11O94913 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.12□□□□□ -2.07
PCF11O94913 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.12□□□□□ -2.07
PCF11O94913 SUMO2P6-201ENST00000505273 288 ntBASIC2.12□□□□□ -2.07
PCF11O94913 SUB1P1-201ENST00000524415 382 ntBASIC2.12□□□□□ -2.07
PCF11O94913 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.12□□□□□ -2.07
PCF11O94913 AC112503.2-201ENST00000609005 552 ntBASIC2.12□□□□□ -2.07
PCF11O94913 AC243773.3-201ENST00000613270 256 ntBASIC2.12□□□□□ -2.07
PCF11O94913 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.12□□□□□ -2.07
PCF11O94913 AC009812.4-201ENST00000569134 1805 ntBASIC2.12□□□□□ -2.07
PCF11O94913 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCF11O94913 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCF11O94913 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.11□□□□□ -2.07
PCF11O94913 RNU1-52P-201ENST00000384190 164 ntBASIC2.11□□□□□ -2.07
PCF11O94913 MIR222-201ENST00000384992 110 ntBASIC2.11□□□□□ -2.07
PCF11O94913 AL445183.3-201ENST00000414168 502 ntBASIC2.11□□□□□ -2.07
PCF11O94913 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCF11O94913 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.11□□□□□ -2.07
PCF11O94913 MTND2P21-201ENST00000436242 1042 ntBASIC2.11□□□□□ -2.07
PCF11O94913 AL139109.1-201ENST00000455491 297 ntBASIC2.11□□□□□ -2.07
PCF11O94913 RNU6-420P-201ENST00000458780 107 ntBASIC2.11□□□□□ -2.07
PCF11O94913 OR52A4P-202ENST00000481634 799 ntBASIC2.11□□□□□ -2.07
PCF11O94913 MIR5000-201ENST00000577717 103 ntBASIC2.11□□□□□ -2.07
PCF11O94913 AC013553.2-201ENST00000604244 589 ntBASIC2.11□□□□□ -2.07
PCF11O94913 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCF11O94913 AC079395.3-201ENST00000615161 484 ntBASIC2.11□□□□□ -2.07
PCF11O94913 AP003400.6-201ENST00000624698 740 ntBASIC2.11□□□□□ -2.07
PCF11O94913 ENSAP3-201ENST00000312710 333 ntBASIC2.1□□□□□ -2.07
PCF11O94913 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCF11O94913 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCF11O94913 RNU6-543P-201ENST00000362576 108 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AL030996.1-201ENST00000411430 235 ntBASIC2.1□□□□□ -2.07
PCF11O94913 ARL2BPP3-201ENST00000421226 480 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AC007560.1-201ENST00000426912 237 ntBASIC2.1□□□□□ -2.07
PCF11O94913 RAB11AP1-201ENST00000442978 646 ntBASIC2.1□□□□□ -2.07
PCF11O94913 MTND1P33-201ENST00000446251 917 ntBASIC2.1□□□□□ -2.07
PCF11O94913 HMGN2P18-201ENST00000450680 270 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AC104164.3-201ENST00000467363 1258 ntBASIC2.1□□□□□ -2.07
PCF11O94913 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.1□□□□□ -2.07
PCF11O94913 RNU6-202P-201ENST00000515998 96 ntBASIC2.1□□□□□ -2.07
PCF11O94913 RNU6-1095P-201ENST00000516148 108 ntBASIC2.1□□□□□ -2.07
PCF11O94913 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PCF11O94913 AC008676.3-201ENST00000521237 435 ntBASIC2.1□□□□□ -2.07
PCF11O94913 HAUS1P3-201ENST00000523909 662 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AC010738.1-201ENST00000604970 987 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AC021851.1-201ENST00000608537 1082 ntBASIC2.1□□□□□ -2.07
PCF11O94913 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCF11O94913 DEFB108F-201ENST00000344638 222 ntBASIC2.1□□□□□ -2.07
PCF11O94913 SNORA70.7-201ENST00000384159 133 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AL445305.1-201ENST00000432577 575 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.1□□□□□ -2.07
PCF11O94913 AC009296.1-201ENST00000443146 155 ntBASIC2.1□□□□□ -2.07
PCF11O94913 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.1□□□□□ -2.07
PCF11O94913 FO393415.2-201ENST00000480085 343 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AC006499.2-201ENST00000513470 337 ntBASIC2.1□□□□□ -2.07
PCF11O94913 BTF3P12-201ENST00000519620 469 ntBASIC2.1□□□□□ -2.07
PCF11O94913 DEFB108D-201ENST00000527787 222 ntBASIC2.1□□□□□ -2.07
PCF11O94913 EEF1B2P4-201ENST00000551398 348 ntBASIC2.1□□□□□ -2.07
PCF11O94913 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms