Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC093155.1-201ENST00000440164 826 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.07□□□□□ -2.08
SHOX2O60902 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SHOX2O60902 HMGN2P23-201ENST00000456759 269 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 AC008427.1-201ENST00000503102 655 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.07□□□□□ -2.08
SHOX2O60902 AC022447.1-201ENST00000515358 464 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 BTF3P12-201ENST00000519620 469 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.07□□□□□ -2.08
SHOX2O60902 AC009127.3-201ENST00000570531 403 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
SHOX2O60902 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.07□□□□□ -2.08
SHOX2O60902 AL583856.2-201ENST00000606298 543 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 AL158211.4-201ENST00000606988 584 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.07□□□□□ -2.08
SHOX2O60902 AC120349.2-201ENST00000625002 298 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 AC107982.1-201ENST00000507171 1300 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
SHOX2O60902 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHOX2O60902 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SHOX2O60902 RNU6-28P-201ENST00000362378 107 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHOX2O60902 SNORD65.1-201ENST00000390889 71 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 RNU4-72P-201ENST00000410754 173 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.06□□□□□ -2.08
SHOX2O60902 PTP4A1P7-201ENST00000423476 514 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 AC092634.2-201ENST00000428146 1010 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 AL592045.1-201ENST00000429867 352 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 AC244505.3-201ENST00000454598 187 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 RPS20P20-201ENST00000460498 340 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 MRPS17P3-201ENST00000465453 385 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 RPL23AP41-201ENST00000484754 458 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.06□□□□□ -2.08
SHOX2O60902 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHOX2O60902 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.06□□□□□ -2.08
SHOX2O60902 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SHOX2O60902 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 RNU2-44P-201ENST00000516795 194 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 RNA5SP480-201ENST00000516840 109 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.06□□□□□ -2.08
SHOX2O60902 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SHOX2O60902 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.06□□□□□ -2.08
SHOX2O60902 HMGN2P15-201ENST00000585707 270 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.06□□□□□ -2.08
SHOX2O60902 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.06□□□□□ -2.08
SHOX2O60902 AC025594.3-201ENST00000613068 790 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.06□□□□□ -2.08
SHOX2O60902 AC004520.1-201ENST00000608362 1413 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.06□□□□□ -2.08
SHOX2O60902 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.06□□□□□ -2.08
SHOX2O60902 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SHOX2O60902 Y_RNA.112-201ENST00000363250 102 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHOX2O60902 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SHOX2O60902 RPL7P27-201ENST00000403775 720 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.05□□□□□ -2.08
SHOX2O60902 MTCYBP45-201ENST00000435243 565 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AL451074.3-201ENST00000437709 472 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 TRGVB-201ENST00000453257 471 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.05□□□□□ -2.08
SHOX2O60902 snoU13.8-201ENST00000458890 104 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AC068781.1-201ENST00000488231 618 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.05□□□□□ -2.08
SHOX2O60902 RNU5F-8P-201ENST00000515941 111 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.05□□□□□ -2.08
SHOX2O60902 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
SHOX2O60902 AP003122.3-201ENST00000526316 255 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 MTCO3P15-201ENST00000526563 574 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.05□□□□□ -2.08
SHOX2O60902 CYB5AP5-201ENST00000549779 389 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AL390208.1-201ENST00000605885 644 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.05□□□□□ -2.08
SHOX2O60902 OR10AB1P-201ENST00000609613 938 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AC005332.10-201ENST00000612725 619 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AC243773.3-201ENST00000613270 256 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.05□□□□□ -2.08
SHOX2O60902 AC025034.2-201ENST00000623264 286 ntBASIC2.05□□□□□ -2.08
SHOX2O60902 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.05□□□□□ -2.08
SHOX2O60902 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.05□□□□□ -2.08
SHOX2O60902 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SHOX2O60902 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
SHOX2O60902 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 RNA5SP289-201ENST00000362332 137 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 SNORA25.9-201ENST00000365087 128 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 MCTS2P-201ENST00000394552 546 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 MIR888-201ENST00000401186 77 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 RNU2-33P-201ENST00000410344 192 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 AC096649.2-201ENST00000416186 393 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.04□□□□□ -2.08
SHOX2O60902 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.04□□□□□ -2.08
SHOX2O60902 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SHOX2O60902 AC007560.1-201ENST00000426912 237 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 AL139415.2-201ENST00000431968 163 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.04□□□□□ -2.08
SHOX2O60902 RPS15AP5-201ENST00000436276 388 ntBASIC2.04□□□□□ -2.08
SHOX2O60902 MTND4P6-201ENST00000438297 472 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms