Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 VDAC1P3-201ENST00000434069 851 ntBASIC3.05□□□□□ -1.92
PRKNO60260 MTATP6P16-201ENST00000434543 526 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RPL23AP83-201ENST00000434984 473 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RPL26P6-201ENST00000440913 438 ntBASIC3.05□□□□□ -1.92
PRKNO60260 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 MTND4P18-201ENST00000447010 465 ntBASIC3.05□□□□□ -1.92
PRKNO60260 GAPDHP27-201ENST00000447427 1020 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.05□□□□□ -1.92
PRKNO60260 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.05□□□□□ -1.92
PRKNO60260 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 SNORD97-201ENST00000459187 142 ntBASIC3.05□□□□□ -1.92
PRKNO60260 CENPBD1P1-201ENST00000464061 469 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC006512.1-201ENST00000468816 291 ntBASIC3.05□□□□□ -1.92
PRKNO60260 VN1R17P-201ENST00000472048 1090 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RPS4XP13-201ENST00000483219 789 ntBASIC3.05□□□□□ -1.92
PRKNO60260 RPL32P34-201ENST00000486380 400 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 RNU6-1073P-201ENST00000517182 106 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC100870.1-201ENST00000522035 505 ntBASIC3.05□□□□□ -1.92
PRKNO60260 ERHP1-201ENST00000523006 310 ntBASIC3.05□□□□□ -1.92
PRKNO60260 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.05□□□□□ -1.92
PRKNO60260 AP001646.1-201ENST00000527936 915 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 SNRPGP16-201ENST00000533275 226 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.05□□□□□ -1.92
PRKNO60260 OR4H12P-201ENST00000556269 907 ntBASIC3.05□□□□□ -1.92
PRKNO60260 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.05□□□□□ -1.92
PRKNO60260 HMGB1P6-201ENST00000569046 646 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC012182.1-201ENST00000570133 895 ntBASIC3.05□□□□□ -1.92
PRKNO60260 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.05□□□□□ -1.92
PRKNO60260 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.05□□□□□ -1.92
PRKNO60260 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.05□□□□□ -1.92
PRKNO60260 AP001330.4-201ENST00000604350 154 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC104458.1-201ENST00000608243 463 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC110801.1-201ENST00000623590 212 ntBASIC3.05□□□□□ -1.92
PRKNO60260 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.05□□□□□ -1.92
PRKNO60260 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.05□□□□□ -1.92
PRKNO60260 AC073346.2-201ENST00000624724 2058 ntBASIC3.05□□□□□ -1.92
PRKNO60260 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PRKNO60260 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 AP001350.1-201ENST00000601906 1524 ntBASIC3.04□□□□□ -1.92
PRKNO60260 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PRKNO60260 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
PRKNO60260 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 Y_RNA.89-201ENST00000363031 102 ntBASIC3.04□□□□□ -1.92
PRKNO60260 Y_RNA.295-201ENST00000364918 102 ntBASIC3.04□□□□□ -1.92
PRKNO60260 Y_RNA.573-201ENST00000384763 105 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AL359634.1-202ENST00000404721 284 ntBASIC3.04□□□□□ -1.92
PRKNO60260 RNU2-39P-201ENST00000410604 198 ntBASIC3.04□□□□□ -1.92
PRKNO60260 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 DUTP6-201ENST00000425573 462 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.04□□□□□ -1.92
PRKNO60260 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.04□□□□□ -1.92
PRKNO60260 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.04□□□□□ -1.92
PRKNO60260 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.04□□□□□ -1.92
PRKNO60260 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.04□□□□□ -1.92
PRKNO60260 RPL23AP67-201ENST00000465341 474 ntBASIC3.04□□□□□ -1.92
PRKNO60260 RPS27AP1-201ENST00000475545 471 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.04□□□□□ -1.92
PRKNO60260 AC116353.2-201ENST00000505332 712 ntBASIC3.04□□□□□ -1.92
PRKNO60260 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.04□□□□□ -1.92
PRKNO60260 RNU6-1092P-201ENST00000516955 87 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.04□□□□□ -1.92
PRKNO60260 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.04□□□□□ -1.92
PRKNO60260 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.04□□□□□ -1.92
PRKNO60260 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.04□□□□□ -1.92
PRKNO60260 MIR5680-201ENST00000577577 84 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.04□□□□□ -1.92
PRKNO60260 AC012443.1-201ENST00000605605 231 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.04□□□□□ -1.92
PRKNO60260 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.04□□□□□ -1.92
PRKNO60260 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PRKNO60260 AL589994.2-201ENST00000621124 579 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AL360181.4-201ENST00000621752 134 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AC092628.2-201ENST00000622492 339 ntBASIC3.04□□□□□ -1.92
PRKNO60260 FRG1KP-201ENST00000623592 341 ntBASIC3.04□□□□□ -1.92
PRKNO60260 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.04□□□□□ -1.92
PRKNO60260 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PRKNO60260 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PRKNO60260 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PRKNO60260 AC073343.1-201ENST00000328239 651 ntBASIC3.03□□□□□ -1.92
PRKNO60260 Y_RNA.38-201ENST00000362617 102 ntBASIC3.03□□□□□ -1.92
PRKNO60260 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PRKNO60260 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.03□□□□□ -1.92
PRKNO60260 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
PRKNO60260 RNU6-701P-201ENST00000384059 107 ntBASIC3.03□□□□□ -1.92
PRKNO60260 SNORA9-201ENST00000384215 133 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RNU6-1158P-201ENST00000391167 107 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RNU2-71P-201ENST00000411395 189 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.03□□□□□ -1.92
PRKNO60260 AC007390.1-201ENST00000415722 356 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms