Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 UBE2L2-201ENST00000254302 429 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.13□□□□□ -1.91
SMAD9O15198 RNU6-1167P-201ENST00000363227 94 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RNU6-14P-201ENST00000384630 106 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RN7SKP285-201ENST00000410137 318 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AC114491.1-201ENST00000416095 246 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMAD9O15198 FABP5P13-201ENST00000452144 328 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RBMY2UP-201ENST00000453474 324 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.13□□□□□ -1.91
SMAD9O15198 AL135752.1-201ENST00000479477 471 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RN7SL293P-201ENST00000481765 281 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 PHBP14-201ENST00000512887 367 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.13□□□□□ -1.91
SMAD9O15198 RNU2-27P-201ENST00000516185 142 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 SNORA74D-201ENST00000516404 141 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RNU6-1282P-201ENST00000516735 96 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RNU6-677P-201ENST00000516914 101 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RNA5SP471-201ENST00000516971 106 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RNA5SP290-201ENST00000517133 127 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 AP003072.2-201ENST00000527756 676 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 FAM92A1P1-201ENST00000528023 890 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 AC037471.2-201ENST00000564941 598 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AC098826.3-201ENST00000603823 466 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AL022154.1-201ENST00000604698 785 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AC012557.2-201ENST00000605919 418 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 RMST_8.1-201ENST00000610287 165 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 AL365204.3-201ENST00000612448 685 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SMAD9O15198 AL158209.2-201ENST00000619266 216 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD9O15198 AC009161.2-201ENST00000624626 138 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD9O15198 U6.105-201ENST00000637379 88 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMAD9O15198 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMAD9O15198 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD9O15198 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
SMAD9O15198 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SMAD9O15198 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD9O15198 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD9O15198 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SMAD9O15198 Y_RNA.41-201ENST00000362646 102 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RNU6-512P-201ENST00000364438 103 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 Y_RNA.245-201ENST00000364493 95 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 Y_RNA.367-201ENST00000365544 101 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RNU6-190P-201ENST00000384154 102 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 SNORA9-201ENST00000384215 133 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 MIR1-2-201ENST00000384961 85 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RNU6-817P-201ENST00000391083 104 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AL139397.2-201ENST00000404529 772 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RNU4-55P-201ENST00000410731 137 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.12□□□□□ -1.91
SMAD9O15198 SDCBPP3-201ENST00000419629 891 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RPL23AP69-201ENST00000431134 458 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AL353705.1-201ENST00000433468 480 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 MTATP6P16-201ENST00000434543 526 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AC002486.1-201ENST00000435098 391 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RPL36AP6-201ENST00000435770 321 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 BNIP3P2-201ENST00000441221 577 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD9O15198 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD9O15198 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 AC093899.1-201ENST00000457984 376 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AC126389.1-201ENST00000477436 290 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AC079382.1-201ENST00000493346 557 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 HMGB1P29-201ENST00000505659 499 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AC116562.3-201ENST00000506136 177 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RNU6-720P-201ENST00000516363 108 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 SCARNA13-201ENST00000516672 275 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.12□□□□□ -1.91
SMAD9O15198 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD9O15198 AP001646.1-201ENST00000527936 915 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 AC068587.5-201ENST00000528506 175 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 OR4R1P-201ENST00000529879 463 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 OR5B19P-201ENST00000531766 928 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AP000867.2-201ENST00000532468 320 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD9O15198 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD9O15198 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms