Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 GDI2P2-201ENST00000445131 608 ntBASIC1.59□□□□□ -2.16
CHD1O14646 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.59□□□□□ -2.16
CHD1O14646 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.59□□□□□ -2.16
CHD1O14646 HMGB1P22-201ENST00000505315 124 ntBASIC1.59□□□□□ -2.16
CHD1O14646 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.59□□□□□ -2.16
CHD1O14646 CASP1P1-201ENST00000526345 212 ntBASIC1.59□□□□□ -2.16
CHD1O14646 MIR6857-201ENST00000613267 93 ntBASIC1.59□□□□□ -2.16
CHD1O14646 AL355810.1-201ENST00000614629 552 ntBASIC1.59□□□□□ -2.16
CHD1O14646 MIR6513-201ENST00000621188 64 ntBASIC1.59□□□□□ -2.16
CHD1O14646 AC068620.4-201ENST00000636730 1182 ntBASIC1.59□□□□□ -2.16
CHD1O14646 RNU4-42P-201ENST00000364738 142 ntBASIC1.58□□□□□ -2.16
CHD1O14646 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHD1O14646 MTCYBP24-201ENST00000420387 1106 ntBASIC1.58□□□□□ -2.16
CHD1O14646 AC015908.1-201ENST00000478739 476 ntBASIC1.58□□□□□ -2.16
CHD1O14646 RPL30P14-201ENST00000482744 348 ntBASIC1.58□□□□□ -2.16
CHD1O14646 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.58□□□□□ -2.16
CHD1O14646 PRELID3BP4-201ENST00000515476 571 ntBASIC1.58□□□□□ -2.16
CHD1O14646 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.58□□□□□ -2.16
CHD1O14646 MIR4287-201ENST00000579398 78 ntBASIC1.58□□□□□ -2.16
CHD1O14646 BNIP3P7-201ENST00000605641 516 ntBASIC1.58□□□□□ -2.16
CHD1O14646 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.58□□□□□ -2.16
CHD1O14646 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHD1O14646 CIR1P3-201ENST00000405137 479 ntBASIC1.57□□□□□ -2.16
CHD1O14646 RNU2-21P-201ENST00000410368 188 ntBASIC1.57□□□□□ -2.16
CHD1O14646 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD1O14646 AL121601.2-201ENST00000438019 707 ntBASIC1.57□□□□□ -2.16
CHD1O14646 AC004022.1-201ENST00000447766 1066 ntBASIC1.57□□□□□ -2.16
CHD1O14646 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.57□□□□□ -2.16
CHD1O14646 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD1O14646 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.57□□□□□ -2.16
CHD1O14646 AL109933.3-201ENST00000619095 188 ntBASIC1.57□□□□□ -2.16
CHD1O14646 AC068880.5-201ENST00000624331 290 ntBASIC1.57□□□□□ -2.16
CHD1O14646 MIR924-201ENST00000638017 53 ntBASIC1.57□□□□□ -2.16
CHD1O14646 HAUS6P2-201ENST00000433254 2404 ntBASIC1.57□□□□□ -2.16
CHD1O14646 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CHD1O14646 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD1O14646 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD1O14646 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD1O14646 AL360221.1-201ENST00000445989 335 ntBASIC1.57□□□□□ -2.16
CHD1O14646 AC036111.3-201ENST00000526389 112 ntBASIC1.57□□□□□ -2.16
CHD1O14646 MTND2P26-201ENST00000528255 1029 ntBASIC1.57□□□□□ -2.16
CHD1O14646 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD1O14646 MIR548Y-201ENST00000582739 110 ntBASIC1.57□□□□□ -2.16
CHD1O14646 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.57□□□□□ -2.16
CHD1O14646 AC012213.4-201ENST00000606457 354 ntBASIC1.57□□□□□ -2.16
CHD1O14646 MIR8087-201ENST00000612745 78 ntBASIC1.57□□□□□ -2.16
CHD1O14646 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CHD1O14646 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHD1O14646 RNU6-17P-201ENST00000384245 107 ntBASIC1.56□□□□□ -2.16
CHD1O14646 RNU6-18P-201ENST00000384527 107 ntBASIC1.56□□□□□ -2.16
CHD1O14646 RPL7P27-201ENST00000403775 720 ntBASIC1.56□□□□□ -2.16
CHD1O14646 AC244636.1-201ENST00000421152 228 ntBASIC1.56□□□□□ -2.16
CHD1O14646 CR848007.2-201ENST00000424918 787 ntBASIC1.56□□□□□ -2.16
CHD1O14646 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD1O14646 AC234064.1-201ENST00000436312 247 ntBASIC1.56□□□□□ -2.16
CHD1O14646 NAP1L1P3-201ENST00000462291 880 ntBASIC1.56□□□□□ -2.16
CHD1O14646 AC020699.1-201ENST00000505161 445 ntBASIC1.56□□□□□ -2.16
CHD1O14646 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD1O14646 AC109809.1-201ENST00000619665 545 ntBASIC1.56□□□□□ -2.16
CHD1O14646 AC095031.1-201ENST00000623685 672 ntBASIC1.56□□□□□ -2.16
CHD1O14646 MTND4P31-201ENST00000425607 1343 ntBASIC1.56□□□□□ -2.16
CHD1O14646 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD1O14646 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHD1O14646 UBE2D3P2-201ENST00000424409 445 ntBASIC1.55□□□□□ -2.16
CHD1O14646 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD1O14646 AL357134.1-201ENST00000445848 426 ntBASIC1.55□□□□□ -2.16
CHD1O14646 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.55□□□□□ -2.16
CHD1O14646 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD1O14646 RNA5SP310-201ENST00000459084 116 ntBASIC1.55□□□□□ -2.16
CHD1O14646 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD1O14646 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.55□□□□□ -2.16
CHD1O14646 RNA5SP121-201ENST00000516537 101 ntBASIC1.55□□□□□ -2.16
CHD1O14646 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.55□□□□□ -2.16
CHD1O14646 AC087465.1-201ENST00000560574 245 ntBASIC1.55□□□□□ -2.16
CHD1O14646 AC079148.1-201ENST00000565944 819 ntBASIC1.55□□□□□ -2.16
CHD1O14646 AC105036.1-201ENST00000566222 271 ntBASIC1.55□□□□□ -2.16
CHD1O14646 AC115085.1-201ENST00000588924 229 ntBASIC1.55□□□□□ -2.16
CHD1O14646 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD1O14646 AL355297.2-201ENST00000604792 129 ntBASIC1.55□□□□□ -2.16
CHD1O14646 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.55□□□□□ -2.16
CHD1O14646 ZNF37BP-203ENST00000452306 1352 ntBASIC1.55□□□□□ -2.16
CHD1O14646 RPS15AP40-201ENST00000419621 391 ntBASIC1.54□□□□□ -2.16
CHD1O14646 AC004941.2-201ENST00000427009 228 ntBASIC1.54□□□□□ -2.16
CHD1O14646 snoU13.4-201ENST00000458916 104 ntBASIC1.54□□□□□ -2.16
CHD1O14646 snoU13.7-201ENST00000459220 104 ntBASIC1.54□□□□□ -2.16
CHD1O14646 CABYRP1-201ENST00000465493 1045 ntBASIC1.54□□□□□ -2.16
CHD1O14646 RPS23P4-201ENST00000487908 423 ntBASIC1.54□□□□□ -2.16
CHD1O14646 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.54□□□□□ -2.16
CHD1O14646 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.54□□□□□ -2.16
CHD1O14646 AC104108.1-201ENST00000509930 412 ntBASIC1.54□□□□□ -2.16
CHD1O14646 EIF4EP5-201ENST00000528228 640 ntBASIC1.54□□□□□ -2.16
CHD1O14646 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.54□□□□□ -2.16
CHD1O14646 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.54□□□□□ -2.16
CHD1O14646 UBE2L4-201ENST00000587688 464 ntBASIC1.54□□□□□ -2.16
CHD1O14646 AC011330.2-201ENST00000621680 635 ntBASIC1.54□□□□□ -2.16
CHD1O14646 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CHD1O14646 AC018630.2-201ENST00000534866 2403 ntBASIC1.54□□□□□ -2.16
CHD1O14646 U8.3-201ENST00000363321 132 ntBASIC1.54□□□□□ -2.16
CHD1O14646 RNA5SP252-201ENST00000391131 119 ntBASIC1.54□□□□□ -2.16
CHD1O14646 AC079776.3-201ENST00000450665 370 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms