Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL118508.4-201ENST00000624142 1176 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.88□□□□□ -2.27
CACNA1AO00555 RNY3P14-201ENST00000384309 102 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 MIR1285-1-201ENST00000408593 84 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 RPL21P90-201ENST00000415692 466 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 HSPE1P1-201ENST00000421494 318 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 PABPC1P3-201ENST00000469174 459 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 AC135999.1-201ENST00000478962 479 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.88□□□□□ -2.27
CACNA1AO00555 AP005597.4-201ENST00000526762 229 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 CD24P2-201ENST00000565486 219 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 AC092140.2-201ENST00000618027 521 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CACNA1AO00555 Y_RNA.495-201ENST00000384435 112 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 Y_RNA.514-201ENST00000384528 112 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 AL591704.2-201ENST00000421658 181 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 PSMA2P3-201ENST00000429685 675 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1AO00555 AC098583.1-201ENST00000480875 255 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 AC114322.1-201ENST00000506771 926 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 RNA5SP82-201ENST00000516707 92 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 SNORD56.5-201ENST00000364281 72 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 Y_RNA.403-201ENST00000383977 101 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 RNU1-101P-201ENST00000391171 127 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 NUP35P2-201ENST00000416748 943 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 SUMO1P4-201ENST00000429430 302 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.87□□□□□ -2.27
CACNA1AO00555 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CACNA1AO00555 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1AO00555 NOP56P3-201ENST00000549457 385 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 AC013470.4-201ENST00000619978 986 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 AC112487.2-201ENST00000637950 304 ntBASIC0.87□□□□□ -2.27
CACNA1AO00555 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CACNA1AO00555 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.87□□□□□ -2.27
CACNA1AO00555 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
CACNA1AO00555 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CACNA1AO00555 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CACNA1AO00555 RPL5P19-201ENST00000404228 893 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 IFNA20P-201ENST00000436840 528 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 AL031659.1-201ENST00000447075 539 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1AO00555 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1AO00555 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1AO00555 AC018754.1-201ENST00000607486 925 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 SNORA63.3-201ENST00000362682 132 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1AO00555 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.86□□□□□ -2.27
CACNA1AO00555 RPL31P63-201ENST00000422565 375 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1AO00555 RPL23AP41-201ENST00000484754 458 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.86□□□□□ -2.27
CACNA1AO00555 HSPE1P14-201ENST00000605812 302 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 uc_338.20-201ENST00000621563 178 ntBASIC0.86□□□□□ -2.27
CACNA1AO00555 U8.14-201ENST00000390843 143 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.85□□□□□ -2.27
CACNA1AO00555 AP000949.1-201ENST00000438328 629 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 AL121871.1-201ENST00000443413 436 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1AO00555 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1AO00555 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CACNA1AO00555 ANP32BP3-201ENST00000559213 706 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.85□□□□□ -2.27
CACNA1AO00555 Y_RNA.52-201ENST00000362760 96 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 RNU6-942P-201ENST00000363002 107 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 SNORA62.1-201ENST00000364287 154 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 AC109780.2-201ENST00000413467 845 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1AO00555 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.85□□□□□ -2.27
CACNA1AO00555 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1AO00555 AC023141.11-201ENST00000508864 202 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 HMGB3P3-201ENST00000510526 400 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 AC010928.2-201ENST00000588017 287 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.85□□□□□ -2.27
CACNA1AO00555 MIR5087-201ENST00000635826 76 ntBASIC0.85□□□□□ -2.27
CACNA1AO00555 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.84□□□□□ -2.27
CACNA1AO00555 MTCO1P23-201ENST00000415223 1526 ntBASIC0.84□□□□□ -2.27
CACNA1AO00555 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.84□□□□□ -2.27
CACNA1AO00555 AL050343.2-201ENST00000607338 280 ntBASIC0.84□□□□□ -2.27
CACNA1AO00555 RNU6-989P-201ENST00000362756 107 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 RNU6-1263P-201ENST00000384601 106 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 MORF4L1P7-201ENST00000426038 703 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1AO00555 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.84□□□□□ -2.28
CACNA1AO00555 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1AO00555 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1AO00555 MTCO1P30-201ENST00000515244 580 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 OR5AQ1P-201ENST00000527596 927 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1AO00555 MIR4493-201ENST00000584016 73 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 AC002545.1-201ENST00000592511 181 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 AC113368.1-201ENST00000603736 382 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 AC024060.1-201ENST00000607052 494 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 AC097655.1-201ENST00000635075 318 ntBASIC0.84□□□□□ -2.28
CACNA1AO00555 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CACNA1AO00555 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CACNA1AO00555 AL356057.2-201ENST00000403318 432 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms