Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AP000942.3-201ENST00000603702 160 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGN4O00479 AP002791.1-201ENST00000623291 381 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC040168.1-201ENST00000623594 991 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AC068057.2-201ENST00000624047 895 ntBASIC0.99□□□□□ -2.25
HMGN4O00479 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGN4O00479 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.99□□□□□ -2.25
HMGN4O00479 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGN4O00479 MIR150-201ENST00000385048 84 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 NPM1P10-201ENST00000398310 865 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AL035405.1-201ENST00000400795 710 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 MIR934-201ENST00000401241 83 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AL033519.2-201ENST00000403958 392 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AL589655.1-201ENST00000405398 482 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 RPS12P24-201ENST00000412619 387 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC092648.1-201ENST00000425870 423 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 HMGN2P18-201ENST00000450680 270 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGN4O00479 C1DP3-201ENST00000455013 423 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.98□□□□□ -2.25
HMGN4O00479 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGN4O00479 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGN4O00479 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGN4O00479 AC005410.1-202ENST00000460347 485 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC114982.2-201ENST00000461396 358 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 RPL30P12-201ENST00000474666 353 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.98□□□□□ -2.25
HMGN4O00479 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HMGN4O00479 AL359273.1-201ENST00000510918 627 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC008834.1-201ENST00000511612 175 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC022616.2-201ENST00000523185 300 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGN4O00479 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.98□□□□□ -2.25
HMGN4O00479 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.98□□□□□ -2.25
HMGN4O00479 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGN4O00479 AL078605.1-201ENST00000603529 500 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC110792.4-201ENST00000609843 298 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC092140.2-201ENST00000618027 521 ntBASIC0.98□□□□□ -2.25
HMGN4O00479 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGN4O00479 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
HMGN4O00479 Y_RNA.140-201ENST00000363474 103 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 RNU6-482P-201ENST00000391068 107 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 RNA5SP450-201ENST00000411206 102 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 AC010385.1-201ENST00000412374 256 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 EDDM3CP-201ENST00000415977 425 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 AL590233.1-201ENST00000430017 456 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGN4O00479 MTND4LP10-201ENST00000435146 291 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGN4O00479 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.97□□□□□ -2.25
HMGN4O00479 AC080013.2-201ENST00000460866 323 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
HMGN4O00479 AC117525.1-201ENST00000515228 503 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HMGN4O00479 SUB1P3-201ENST00000564581 315 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 MIR3921-201ENST00000577308 85 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
HMGN4O00479 MIR4524B-201ENST00000581569 115 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 AL021997.1-201ENST00000605757 193 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 U4atac.1-201ENST00000618345 95 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 AL445493.3-201ENST00000619568 477 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 MIR7157-201ENST00000635801 60 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 OR4G11P-202ENST00000642116 1414 ntBASIC0.97□□□□□ -2.25
HMGN4O00479 AL391987.6-201ENST00000305671 199 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 DEFB108F-201ENST00000344638 222 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 SNORA62.1-201ENST00000364287 154 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 HMGN2P39-201ENST00000398005 273 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGN4O00479 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGN4O00479 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.96□□□□□ -2.26
HMGN4O00479 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGN4O00479 GDI2P2-201ENST00000445131 608 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 MTCO1P48-201ENST00000448024 1096 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.96□□□□□ -2.26
HMGN4O00479 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HMGN4O00479 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HMGN4O00479 AC025459.1-201ENST00000504072 156 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 AC008526.1-201ENST00000509149 338 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 LTV1P1-201ENST00000510683 1237 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGN4O00479 RNU6-488P-201ENST00000515918 99 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 RNU6-1282P-201ENST00000516735 96 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 SCARNA3-201ENST00000517097 143 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGN4O00479 C1DP5-201ENST00000525775 383 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 DEFB108D-201ENST00000527787 222 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HMGN4O00479 AC104763.2-201ENST00000604179 382 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 AC068276.1-201ENST00000605793 379 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 MIR6078-201ENST00000611069 100 ntBASIC0.96□□□□□ -2.26
HMGN4O00479 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.96□□□□□ -2.26
HMGN4O00479 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HMGN4O00479 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HMGN4O00479 RNU6-1083P-201ENST00000384022 107 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HMGN4O00479 TAF9BP2-201ENST00000400856 499 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 MIR1290-201ENST00000408735 78 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.95□□□□□ -2.26
HMGN4O00479 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms