Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MTND5P1-201ENST00000445440 1375 ntBASIC3□□□□□ -1.93
CCDC188H7C350 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC188H7C350 AP003122.5-201ENST00000527668 3766 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC188H7C350 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC188H7C350 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CCDC188H7C350 RNU6-288P-201ENST00000363690 104 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 MIR183-201ENST00000384958 110 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 RNU2-8P-201ENST00000410727 190 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 ATG3P1-201ENST00000419507 911 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 SEPT2P1-201ENST00000419651 180 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AL159987.2-201ENST00000432754 307 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC188H7C350 CECR9-201ENST00000453421 199 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 RNU6-953P-201ENST00000459154 107 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC087588.1-201ENST00000462203 316 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC188H7C350 RPS26P21-201ENST00000475397 348 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC103975.1-201ENST00000482506 483 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC105252.1-201ENST00000503089 286 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC010587.1-201ENST00000505809 469 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 FABP5P5-201ENST00000515537 406 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 RNU6-143P-201ENST00000516942 93 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC188H7C350 AP003181.2-201ENST00000528941 181 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC022878.1-201ENST00000530684 149 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC188H7C350 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC188H7C350 OSBPL9P5-201ENST00000542581 171 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AL391261.3-201ENST00000557194 520 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC188H7C350 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC188H7C350 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC188H7C350 MIR3118-1-201ENST00000581787 76 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 HMGN2P15-201ENST00000585707 270 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC007619.2-201ENST00000605743 379 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC008498.1-201ENST00000613012 531 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC034102.8-201ENST00000615146 484 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 U6.105-201ENST00000637379 88 ntBASIC2.99□□□□□ -1.93
CCDC188H7C350 AC092447.7-201ENST00000422212 1621 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC188H7C350 RNY3P9-201ENST00000384727 106 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 MIR592-201ENST00000384959 97 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 MIR634-201ENST00000385208 97 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 U3.19-201ENST00000390893 196 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AL021407.1-201ENST00000404531 386 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 RNU2-68P-201ENST00000410878 191 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC188H7C350 AC093106.2-201ENST00000428212 385 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 MTND1P28-201ENST00000435623 950 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC009296.1-201ENST00000443146 155 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC188H7C350 RPL37P4-201ENST00000448908 268 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 SNRPGP9-201ENST00000456025 225 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 RPS27P26-201ENST00000494583 239 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC026427.2-201ENST00000506228 536 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC114786.4-201ENST00000508771 728 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 RNA5SP165-201ENST00000517142 115 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 HPRT1P3-201ENST00000539521 576 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 RPL21P5-201ENST00000554662 472 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC135628.1-201ENST00000568867 534 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 MIR5680-201ENST00000577577 84 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC188H7C350 AL161798.1-201ENST00000604630 131 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 AC019226.2-201ENST00000625973 424 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC188H7C350 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC188H7C350 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC188H7C350 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC188H7C350 MAPK10-322ENST00000641485 4530 ntBASIC2.98□□□□□ -1.93
CCDC188H7C350 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC188H7C350 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC188H7C350 MIR26A1-201ENST00000362205 77 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 RNY1P12-201ENST00000364251 105 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 MIR888-201ENST00000401186 77 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 ELOCP14-201ENST00000428070 331 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AL513043.1-201ENST00000439124 535 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 ELOCP7-201ENST00000439968 331 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC188H7C350 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC188H7C350 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC188H7C350 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC188H7C350 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC188H7C350 RPL27AP5-201ENST00000469428 449 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 SUMO2P6-201ENST00000505273 288 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC188H7C350 Y_RNA.672-201ENST00000516289 104 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 RNA5SP337-201ENST00000517007 109 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AP006587.4-201ENST00000526053 529 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AP002453.2-201ENST00000533503 320 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms