Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 OR4P1P-201ENST00000530808 1136 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
LINC01549A6NIU2 MIR4653-201ENST00000585107 83 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 MIMT1-201ENST00000597105 1050 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC01549A6NIU2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 FRG1HP-204ENST00000617940 757 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 AC091895.1-201ENST00000624494 256 ntBASIC0.53□□□□□ -2.32
LINC01549A6NIU2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 RNU6-748P-201ENST00000384648 107 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 RPL23AP16-201ENST00000441715 421 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AC098799.1-201ENST00000504752 800 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AC087441.2-201ENST00000529141 262 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AC023825.1-201ENST00000566704 1030 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 BNIP3P22-201ENST00000593399 556 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AL355802.3-201ENST00000607571 545 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AL356585.4-201ENST00000623078 1229 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 Z99571.1-201ENST00000636677 394 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 TPTE2P4-201ENST00000258589 1605 ntBASIC0.52□□□□□ -2.33
LINC01549A6NIU2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LINC01549A6NIU2 RNU6-1155P-201ENST00000363554 107 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 RNA5SP56-201ENST00000410277 118 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 AC006461.1-201ENST00000412637 326 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 EIF4EP2-201ENST00000422816 654 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 MTND2P29-201ENST00000438595 412 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 RNU7-95P-201ENST00000459222 64 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 snoU13.15-201ENST00000459407 104 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 AP000873.5-201ENST00000533906 236 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 OR8K4P-201ENST00000534608 872 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC01549A6NIU2 AC108706.1-201ENST00000611053 297 ntBASIC0.51□□□□□ -2.33
LINC01549A6NIU2 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 RNA5SP258-201ENST00000362750 119 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 RNU6-666P-201ENST00000363499 107 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 RNU1-78P-201ENST00000391248 165 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 RNU4-78P-201ENST00000410940 126 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AC004965.1-201ENST00000413033 213 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 LUZP4P1-201ENST00000415420 344 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 MICF-203ENST00000432679 129 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AL354941.1-201ENST00000438600 464 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 HMGB1P35-201ENST00000503360 598 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 RNU6-322P-201ENST00000516010 103 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 SNORA31.16-201ENST00000516773 139 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 DUXAP5-201ENST00000529668 529 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 CBX3P8-201ENST00000532412 525 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 MIR4513-201ENST00000581077 86 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AL669831.4-202ENST00000590817 238 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AL138478.1-201ENST00000612252 832 ntBASIC0.5□□□□□ -2.33
LINC01549A6NIU2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.5□□□□□ -2.33
LINC01549A6NIU2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 Y_RNA.500-201ENST00000384466 111 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC013410.2-201ENST00000422627 201 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC004941.2-201ENST00000427009 228 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 TRIM60P13-201ENST00000432350 1283 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 CR769776.1-201ENST00000441254 787 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 ARPC3P5-201ENST00000448802 534 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 HMGB1P36-201ENST00000487709 576 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 RPS23P4-201ENST00000487908 423 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC107953.1-201ENST00000522216 297 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AP006587.4-201ENST00000526053 529 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC136932.1-201ENST00000574771 208 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 MIR3199-1-201ENST00000582434 88 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC097468.3-201ENST00000607956 456 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AL391813.2-201ENST00000609113 322 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AC084824.5-201ENST00000612009 413 ntBASIC0.49□□□□□ -2.33
LINC01549A6NIU2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms