Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 Y_RNA.530-201ENST00000384587 101 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 MIR3074-201ENST00000384885 81 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 MIR449B-201ENST00000384995 97 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 RPL21P17-201ENST00000397467 475 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 NDUFB4P5-201ENST00000415445 361 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.654-201ENST00000497848 106 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 MLLT10P2-201ENST00000506434 249 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 HMGN1P11-201ENST00000508668 303 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 SNORA19.2-201ENST00000516013 114 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 RNU6-123P-201ENST00000516163 102 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 RN7SKP209-201ENST00000516888 304 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 RN7SKP60-201ENST00000516985 239 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC135001.1-201ENST00000544546 283 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 SCOCP1-201ENST00000554676 349 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 FAM60BP-201ENST00000578364 658 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 MIR5583-1-201ENST00000580941 59 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC005498.1-201ENST00000592125 465 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC024220.1-201ENST00000603675 484 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 SNORA51-201ENST00000606420 132 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 AC006026.1-201ENST00000444025 1803 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 MAPK10-373ENST00000641983 6772 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 PRO1804-201ENST00000623780 2050 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.378-201ENST00000365652 113 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 RNU6-116P-201ENST00000384042 109 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 SNORA5A-201ENST00000384111 134 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 RNU6-14P-201ENST00000384630 106 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 RAC1P3-201ENST00000416129 580 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL451054.2-201ENST00000420896 202 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 HSPE1P1-201ENST00000421494 318 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC006946.1-201ENST00000429106 328 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL133162.1-201ENST00000463228 453 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC004801.2-202ENST00000463559 283 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC010285.1-201ENST00000470580 392 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 TRBV1-201ENST00000476502 284 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC106872.2-201ENST00000494303 480 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 UBE2CP3-201ENST00000502715 450 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 SNORA31.3-201ENST00000516029 96 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 RNU6-1038P-201ENST00000516516 104 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 RNU6-677P-201ENST00000516914 101 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC007991.1-201ENST00000522680 631 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 RPL23AP84-201ENST00000571193 464 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC044792.1-201ENST00000593294 196 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC007687.1-201ENST00000602704 304 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL138889.2-201ENST00000603883 242 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL670379.4-201ENST00000605279 254 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL022345.1-201ENST00000607292 135 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AL359547.2-201ENST00000615810 418 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC004825.2-201ENST00000616634 455 ntBASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPDC1A2A3K4 AC121333.1-201ENST00000567488 2709 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 RNU4-79P-201ENST00000362764 141 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 RNU6-190P-201ENST00000384154 102 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 RN7SKP140-201ENST00000411196 284 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 USP9YP20-201ENST00000419224 558 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC091286.1-201ENST00000431233 461 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 HMGB1P18-201ENST00000438801 619 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 PPP1R2P5-201ENST00000457256 603 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms