Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.416-201ENST00000384014 113 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 RNU6-629P-201ENST00000384061 103 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.785-201ENST00000384290 109 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 MIR34A-201ENST00000385130 110 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 RAC1P3-201ENST00000416129 580 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC096920.1-201ENST00000423991 241 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AL358472.1-201ENST00000431295 329 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 RPS17P8-201ENST00000434525 335 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC004383.1-201ENST00000438135 289 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 H2AFZP5-201ENST00000446960 382 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 RN7SL558P-201ENST00000497468 299 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC074250.1-201ENST00000511117 192 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC067942.3-201ENST00000512025 362 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 RNU6-612P-201ENST00000516909 102 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC012433.1-201ENST00000588916 398 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 SRGNP1-201ENST00000603392 451 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 SAMMSON-226ENST00000642089 1582 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 SNORD50.1-201ENST00000362987 71 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 MIR10A-201ENST00000385043 110 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 MIR921-201ENST00000401133 56 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNU2-33P-201ENST00000410344 192 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNA5SP494-201ENST00000410653 129 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNU2-25P-201ENST00000411041 191 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RPL7L1P9-201ENST00000431298 745 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 MTND2P29-201ENST00000438595 412 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AC079354.2-201ENST00000453523 154 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 HMGB1P35-201ENST00000503360 598 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AK3P2-201ENST00000507976 429 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNU6-138P-201ENST00000515952 107 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNA5SP43-201ENST00000516559 110 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNU6-182P-201ENST00000516970 105 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNA5SP290-201ENST00000517133 127 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RNU6-111P-201ENST00000517179 105 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 MIR2355-201ENST00000517199 87 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AC103996.1-201ENST00000555468 102 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AC234771.5-201ENST00000600161 514 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 AL139395.1-201ENST00000603662 160 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 MIR6837-201ENST00000620884 64 ntBASIC4.19□□□□□ -1.74
SHISA3A0PJX4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SHISA3A0PJX4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RNA5SP183-201ENST00000362452 119 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.105-201ENST00000363182 111 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RNU6-741P-201ENST00000383889 107 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 SNORA40C-201ENST00000391285 128 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 DUTP5-201ENST00000406790 469 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RNU6-121P-201ENST00000410525 99 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RNU6-1203P-201ENST00000410703 110 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RNU6-130P-201ENST00000411112 103 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RNU2-71P-201ENST00000411395 189 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RPL21P38-201ENST00000418090 167 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RPS12P23-201ENST00000419579 400 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 HIGD1AP2-201ENST00000446367 280 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC092647.2-201ENST00000452998 253 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms