Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AL356967.1-201ENST00000406305 431 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 RN7SKP140-201ENST00000411196 284 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 NDUFB4P5-201ENST00000415445 361 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 SSXP9-201ENST00000417503 292 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 RPL7P46-201ENST00000425129 740 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 GAPDHP27-201ENST00000447427 1020 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 FAM206BP-201ENST00000510179 541 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 Y_RNA.665-201ENST00000516177 98 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 SNORA70.19-201ENST00000516717 90 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC026403.1-201ENST00000518938 295 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 NDUFB9P3-201ENST00000521269 501 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AL137161.1-201ENST00000532231 390 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC093027.1-201ENST00000546698 429 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC005498.1-201ENST00000592125 465 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AL022099.1-201ENST00000604551 712 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC021646.1-201ENST00000605469 484 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AL390240.1-201ENST00000612950 384 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AL589994.2-201ENST00000621124 579 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 MIR1302-1-201ENST00000637932 143 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC103710.2-202ENST00000641454 2853 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 SMIM11P1-201ENST00000369586 178 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-946P-201ENST00000383878 107 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-701P-201ENST00000384059 107 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-831P-201ENST00000384548 107 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 MIR134-201ENST00000385258 73 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC110754.1-201ENST00000399740 601 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6ATAC-201ENST00000408749 126 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU4-46P-201ENST00000410818 138 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-55P-201ENST00000411092 107 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-954P-201ENST00000411355 107 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RPS12P23-201ENST00000419579 400 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL451054.2-201ENST00000420896 202 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 PPP1R11P2-201ENST00000423543 382 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 HMGB1P18-201ENST00000438801 619 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 PPP1R2P5-201ENST00000457256 603 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-277P-201ENST00000516272 106 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RN7SKP60-201ENST00000516985 239 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RPL7P20-201ENST00000520308 745 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RANP3-201ENST00000530970 276 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC011602.1-201ENST00000546484 331 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC005476.1-201ENST00000554427 397 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 ANP32BP3-201ENST00000559213 706 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 HMGB3P26-201ENST00000560051 582 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL355375.2-201ENST00000574825 175 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 MIR3922-201ENST00000585192 84 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL022345.1-201ENST00000607292 135 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AL050343.2-201ENST00000607338 280 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC064836.2-201ENST00000609491 462 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC104237.2-201ENST00000612456 443 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC004696.1-201ENST00000614345 607 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC007998.5-201ENST00000622938 237 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 CR392039.5-201ENST00000623201 510 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AC006065.5-201ENST00000623427 349 ntBASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TCRBV5S1A1TA0A578 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV5S1A1TA0A578 Z73965.1-201ENST00000623412 2297 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms