Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 DDX10P1-201ENST00000448545 1933 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 RNU6-432P-201ENST00000384196 109 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 TAS2R15P-201ENST00000390674 928 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 Z85995.1-201ENST00000415547 335 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 VPS26BP1-201ENST00000417155 755 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 OOSP1P1-201ENST00000423265 274 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AC104332.2-201ENST00000429959 156 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 RPL36AP6-201ENST00000435770 321 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 MTATP6P30-201ENST00000443540 664 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 MTCO1P42-201ENST00000457379 726 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 RNU7-125P-201ENST00000458760 62 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AC068587.2-201ENST00000478386 781 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 RPS3AP22-201ENST00000488297 769 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 RPS15AP36-201ENST00000492022 382 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 RPL30P5-201ENST00000494923 336 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 ARL4AP2-201ENST00000507378 601 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 MRPS33P3-201ENST00000513456 322 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 RNU6-759P-201ENST00000516740 103 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 NRON-201ENST00000517270 370 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AC124947.2-202ENST00000552735 133 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AC008015.1-201ENST00000555505 465 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AC009063.1-201ENST00000563342 702 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 NUTF2P8-201ENST00000604593 363 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AC018638.7-201ENST00000605836 1114 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 AC009159.1-201ENST00000618386 642 ntBASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 Y_RNA.46-201ENST00000362695 102 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-270P-201ENST00000364131 105 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 MTND1P21-201ENST00000412991 285 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 SAR1AP4-201ENST00000429225 591 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RPL7P34-201ENST00000433316 712 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AL049734.2-201ENST00000441066 616 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 MTCO3P45-201ENST00000443036 613 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 EPS15P1-201ENST00000448836 336 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 ART2BP-201ENST00000453501 499 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AP1S2P1-201ENST00000457344 379 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 SETP11-201ENST00000473027 690 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 ANXA2P1-201ENST00000505539 926 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC005178.1-201ENST00000508392 440 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-678P-201ENST00000516832 109 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-840P-201ENST00000517275 65 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AP000867.2-201ENST00000532468 320 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC025281.1-201ENST00000567026 265 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RPL23AP78-201ENST00000599928 470 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AP000770.2-201ENST00000623694 100 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC120349.3-201ENST00000624377 529 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC091965.5-201ENST00000624785 342 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 AC099654.7-201ENST00000635788 2127 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 OR5H6-203ENST00000642105 978 ntBASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SMIM28A0A1B0GU29 RNU5F-6P-201ENST00000362979 116 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 SNORA70B-201ENST00000384210 135 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-809P-201ENST00000384461 107 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AL109755.1-201ENST00000401791 649 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 RPS20P2-201ENST00000402520 389 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 MIR1290-201ENST00000408735 78 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC107081.1-201ENST00000414975 361 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AL451054.2-201ENST00000420896 202 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms