Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ZYG11AP1-201ENST00000430329 837 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AL645568.3-201ENST00000433683 316 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 TPTE2P1-204ENST00000435256 593 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC241584.1-201ENST00000438469 1241 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC092393.1-201ENST00000439625 742 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC140059.1-201ENST00000489238 361 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 RPS27AP10-201ENST00000496103 208 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC008834.1-201ENST00000511612 175 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 SNORA4.4-201ENST00000515921 135 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 NIFKP8-201ENST00000560500 874 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AP001429.1-201ENST00000602568 530 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AL163051.2-201ENST00000618976 735 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 AC007490.1-201ENST00000624321 703 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 MIR3199-2-201ENST00000636243 86 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 MTND1P37-201ENST00000636562 264 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 LINC02211-204ENST00000642024 1070 ntBASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRBV27A0A0K0K1C4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 RNU6-582P-201ENST00000362989 107 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 MIR518A2-201ENST00000384966 87 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 MIR934-201ENST00000401241 83 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 PTGES3P2-201ENST00000407942 482 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 POLHP1-201ENST00000411806 470 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 Z98742.3-201ENST00000418637 326 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 MTND4P24-201ENST00000424002 397 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AL139415.2-201ENST00000431968 163 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 RPS20P22-201ENST00000473700 357 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AC017007.3-201ENST00000479865 435 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 SLC25A15P5-201ENST00000508033 253 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 AL138478.1-201ENST00000612252 832 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 uc_338.14-201ENST00000613162 166 ntBASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRBV27A0A0K0K1C4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 CISD1P1-201ENST00000393907 327 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AL079342.1-201ENST00000401460 267 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 FAM204CP-201ENST00000424489 642 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 FAM103A2P-201ENST00000444122 354 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 USP9YP34-201ENST00000453983 808 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 SUMO2P2-201ENST00000456482 255 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 CKS1BP2-201ENST00000497342 240 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC021146.2-201ENST00000504736 556 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC093752.1-206ENST00000511823 336 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 RNU6-885P-201ENST00000516607 104 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC084851.1-201ENST00000529105 249 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 MIR4713-201ENST00000582691 75 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC068944.2-201ENST00000610373 403 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 uc_338.5-201ENST00000611839 155 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 MIR6798-201ENST00000612887 67 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AC091953.2-201ENST00000623979 160 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 AL512506.2-201ENST00000624472 458 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 Z99571.1-201ENST00000636677 394 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 MTND5P29-201ENST00000458676 1807 ntBASIC1.17□□□□□ -2.22
TRBV27A0A0K0K1C4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 SNORA40.19-201ENST00000390846 128 ntBASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 RNA5SP212-201ENST00000391223 107 ntBASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 RPL7P27-201ENST00000403775 720 ntBASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 NDUFS5P4-201ENST00000412983 318 ntBASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 AL136133.1-201ENST00000413694 376 ntBASIC1.16□□□□□ -2.22
TRBV27A0A0K0K1C4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms