Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 HMGN2P15-201ENST00000585707 270 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC243960.4-201ENST00000600532 288 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AL078605.1-201ENST00000603529 500 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 SUMO2P14-201ENST00000604488 293 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC007038.2-201ENST00000608095 740 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AL592148.2-201ENST00000612210 372 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC091925.2-201ENST00000625059 256 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 ZNF663P-202ENST00000641770 1131 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-543P-201ENST00000362576 108 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-921P-201ENST00000384361 107 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 HMGN2P39-201ENST00000398005 273 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 EDDM3CP-201ENST00000415977 425 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AC024082.2-201ENST00000434771 238 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 DDX3P2-201ENST00000446138 111 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 RPL23AP23-201ENST00000452590 471 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 RPS27P23-201ENST00000487608 251 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 MRPS33P3-201ENST00000513456 322 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-27P-201ENST00000516146 107 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 HAUS1P3-201ENST00000523909 662 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AP001542.2-201ENST00000593141 364 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 U4atac.1-201ENST00000618345 95 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AC090772.4-201ENST00000623599 362 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR7157-201ENST00000635801 60 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 AC009950.2-201ENST00000636548 183 ntBASIC0.92□□□□□ -2.26
TRAV1-2A0A0B4J238 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 Y_RNA.500-201ENST00000384466 111 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR218-1-201ENST00000384999 110 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC244636.1-201ENST00000421152 228 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AL121882.1-201ENST00000422893 417 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 NDUFB4P7-201ENST00000423198 363 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AL590233.1-201ENST00000430017 456 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 DNAJC19P4-201ENST00000440115 345 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 RPL30P12-201ENST00000474666 353 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC117522.2-201ENST00000510049 657 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 SNORA31.6-201ENST00000516241 130 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 DNAJC19P9-201ENST00000555084 351 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC027807.1-201ENST00000559921 996 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC012435.1-202ENST00000568772 240 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC015688.2-201ENST00000584523 262 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC025811.1-201ENST00000604312 472 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC068276.1-201ENST00000605793 379 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC103810.8-201ENST00000607347 118 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AL589743.7-201ENST00000612637 233 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AC006213.4-201ENST00000616184 634 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 AP002791.1-201ENST00000623291 381 ntBASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-1083P-201ENST00000384022 107 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU6-750P-201ENST00000390946 107 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AC092047.1-201ENST00000424997 240 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 RPP40P1-201ENST00000426762 456 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AL022238.1-201ENST00000442557 355 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 GDI2P2-201ENST00000445131 608 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 MTND1P33-201ENST00000446251 917 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AL592447.1-201ENST00000447592 540 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 MTCO1P48-201ENST00000448024 1096 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AC098591.2-201ENST00000510152 315 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AF213884.2-201ENST00000510417 903 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AC008834.1-201ENST00000511612 175 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AC119751.5-201ENST00000514077 770 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 GNAI2P1-201ENST00000541815 315 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 PRR13P7-201ENST00000605538 430 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AC104763.3-201ENST00000613765 618 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AC092140.2-201ENST00000618027 521 ntBASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
TRAV1-2A0A0B4J238 MFSD8-213ENST00000641134 1327 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 SNORD82-201ENST00000365530 70 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 SNORD51-201ENST00000384320 80 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 SNORA8-201ENST00000384574 139 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU6-748P-201ENST00000384648 107 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR934-201ENST00000401241 83 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms