Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AP000916.1-201ENST00000533869 835 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 MIR3683-201ENST00000580847 82 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 UBE2L4-201ENST00000587688 464 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC008121.1-201ENST00000603244 268 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL021997.1-201ENST00000605757 193 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC080013.4-201ENST00000607624 649 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC020658.4-201ENST00000613987 684 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 MIR7157-201ENST00000635801 60 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
TRAV27A0A087WT01 MTND5P10-201ENST00000603719 1809 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 SGO1P1-201ENST00000603525 1447 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 RNA5SP190-201ENST00000365222 118 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 SNORD51.1-201ENST00000365405 77 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 RNU6-76P-201ENST00000384060 104 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 RNU6-878P-201ENST00000384578 110 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 MIR16-1-201ENST00000385271 89 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC003685.2-201ENST00000422795 395 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AL513185.2-201ENST00000425543 193 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 HSPE1P21-201ENST00000438283 308 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC007677.1-201ENST00000445757 515 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 COX7A2P2-201ENST00000505291 250 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC098591.2-201ENST00000510152 315 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC022483.1-201ENST00000514020 567 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 SNORA31.22-201ENST00000517204 135 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AP003066.2-201ENST00000529375 555 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 HSBP1P1-201ENST00000555205 166 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 LARP7P2-201ENST00000575306 125 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC025811.1-201ENST00000604312 472 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC007038.2-201ENST00000608095 740 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 AC091953.2-201ENST00000623979 160 ntBASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV27A0A087WT01 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 RNU6-251P-201ENST00000363235 104 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 RNU6-217P-201ENST00000384164 104 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC018630.2-202ENST00000422992 927 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 OOSP1P1-201ENST00000423265 274 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 Z82210.1-201ENST00000440037 231 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 RPL23AP6-201ENST00000446637 472 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AL050341.1-201ENST00000447743 313 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 SNORD13-201ENST00000459299 104 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 snoU13.15-201ENST00000459407 104 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC080013.2-201ENST00000460866 323 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC008481.1-201ENST00000463278 396 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC048346.1-201ENST00000510247 144 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 SNORA31.6-201ENST00000516241 130 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 SCARNA3-201ENST00000517097 143 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 CBX3P7-201ENST00000532876 502 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AP000873.5-201ENST00000533906 236 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 LINC00933-203ENST00000559812 219 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 DEFB122-202ENST00000569013 197 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AC243960.4-201ENST00000600532 288 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AL035411.2-201ENST00000604022 421 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AP001033.2-201ENST00000609701 1003 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 PISRT1-201ENST00000626175 531 ntBASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV27A0A087WT01 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 RNU6-657P-201ENST00000383904 107 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 SNORD116-23-201ENST00000384645 92 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 RNU6-750P-201ENST00000390946 107 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 AC092047.1-201ENST00000424997 240 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 RPS3AP44-201ENST00000425466 790 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 GTF2IP7-202ENST00000436677 309 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 DNAJC19P4-201ENST00000440115 345 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 MTND2P24-201ENST00000453434 806 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 FO393415.2-201ENST00000480085 343 ntBASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV27A0A087WT01 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms