Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SMURF2P1-201ENST00000514992 481 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 ZNF705CP-201ENST00000530515 889 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AP003034.1-201ENST00000534621 422 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC005832.3-201ENST00000537929 631 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC004217.3-201ENST00000551552 878 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC012468.1-201ENST00000604888 430 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC116312.1-201ENST00000606841 314 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 uc_338.14-201ENST00000613162 166 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 MTND5P29-201ENST00000458676 1807 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 AC110491.1-201ENST00000562191 2010 ntBASIC0.65□□□□□ -2.31
LINC01558Q9Y6Z2 RNA5SP27-201ENST00000363839 119 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 SNORA44-201ENST00000384584 132 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AL139098.1-201ENST00000407291 389 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 RNU2-36P-201ENST00000410361 191 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AL591704.2-201ENST00000421658 181 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC018630.2-202ENST00000422992 927 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 USP9YP24-201ENST00000434374 697 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC098831.1-201ENST00000440661 216 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 RNU6-775P-201ENST00000459318 96 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AK6-203ENST00000502819 743 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC005668.1-201ENST00000571142 476 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 VN1R90P-201ENST00000595717 726 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC125494.3-201ENST00000602759 455 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 HSPE1P19-201ENST00000603327 295 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 MIR502-201ENST00000606349 86 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AC025034.2-201ENST00000623264 286 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 AL512506.2-201ENST00000624472 458 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 ZNF680P1-201ENST00000436625 1469 ntBASIC0.64□□□□□ -2.31
LINC01558Q9Y6Z2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 MTND4P23-201ENST00000447723 1363 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RPL32P3-201ENST00000359025 275 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RNU6-76P-201ENST00000384060 104 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 MIR183-201ENST00000384958 110 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 MIR561-201ENST00000385216 97 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RPL23AP29-201ENST00000397284 453 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RN7SKP32-201ENST00000410167 303 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 PIGPP2-201ENST00000411569 458 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AL024507.1-201ENST00000412741 274 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC009963.1-201ENST00000417265 157 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AL354695.1-201ENST00000427935 228 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 MTCO1P53-201ENST00000441633 699 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RPL23AP16-201ENST00000441715 421 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AL161788.1-201ENST00000441805 169 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RSL24D1P3-201ENST00000449255 495 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 MTND2P24-201ENST00000453434 806 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC018868.1-201ENST00000491307 315 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RNU6-902P-201ENST00000517212 91 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AK6P1-201ENST00000540219 478 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 NDUFA5P6-201ENST00000542110 379 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC009268.1-201ENST00000561352 1203 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC079610.2-201ENST00000604818 690 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AL391597.1-201ENST00000618707 694 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 U1.36-201ENST00000620684 176 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 U6.105-201ENST00000637379 88 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 AC006020.1-201ENST00000420179 1854 ntBASIC0.63□□□□□ -2.31
LINC01558Q9Y6Z2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
LINC01558Q9Y6Z2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms