Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 RNU6-1179P-201ENST00000384667 107 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 MIR124-3-201ENST00000384866 87 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 MIR514A1-201ENST00000385133 98 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 MIR223-201ENST00000385204 110 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AC007098.1-201ENST00000420122 367 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AC108075.1-201ENST00000424692 529 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AC006946.1-201ENST00000429106 328 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 ISCUP1-201ENST00000454451 448 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 RN7SL172P-201ENST00000460535 303 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 RNA5SP373-201ENST00000517271 95 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 ATP5F1P5-201ENST00000526403 760 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 RPL10P14-201ENST00000565265 298 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 MIR3921-201ENST00000577308 85 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 AP002826.1-201ENST00000608835 315 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 RMST_4.1-201ENST00000616886 107 ntBASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DNMT3AQ9Y6K1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 PABPC1P6-201ENST00000445594 1829 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RNU6-1167P-201ENST00000363227 94 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RNU6-335P-201ENST00000364563 113 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RN7SKP153-201ENST00000365026 316 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 Y_RNA.324-201ENST00000365165 102 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 SNORA5.1-201ENST00000384275 131 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 SNORA26.2-201ENST00000390922 122 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AL513475.1-201ENST00000406602 315 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RNY4P30-201ENST00000410216 95 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RNU6-325P-201ENST00000411132 105 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 GNG5P5-201ENST00000420444 220 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AL355433.1-201ENST00000422804 300 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AL049874.1-201ENST00000489560 388 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RN7SL629P-201ENST00000489622 285 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RNA5SP34-201ENST00000516887 130 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 SNORA31.20-201ENST00000517111 133 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AL157871.3-201ENST00000557231 293 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 TGIF1P1-201ENST00000558095 802 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 MIR1269B-201ENST00000580405 75 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AL121917.1-203ENST00000605534 577 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 FP236240.3-201ENST00000623061 327 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 AP001029.2-203ENST00000589795 4910 ntBASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNMT3AQ9Y6K1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 Y_RNA.504-201ENST00000384481 104 ntBASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 Y_RNA.563-201ENST00000384707 108 ntBASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 AL079342.1-201ENST00000401460 267 ntBASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 AL109941.1-201ENST00000401925 229 ntBASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 MIR1290-201ENST00000408735 78 ntBASIC5.22□□□□□ -1.57
DNMT3AQ9Y6K1 CYCSP33-201ENST00000414485 327 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms