Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 AL020997.3-201ENST00000602843 359 ntBASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 MIR6840-201ENST00000611937 71 ntBASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 AL512506.2-201ENST00000624472 458 ntBASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 MIR7157-201ENST00000635801 60 ntBASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 AP003399.1-201ENST00000637534 361 ntBASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 AC010329.5-201ENST00000623497 2174 ntBASIC1.73□□□□□ -2.13
SCN10AQ9Y5Y9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 RNU1-42P-201ENST00000364033 160 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL355615.1-201ENST00000406187 641 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 RNU2-43P-201ENST00000410306 190 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL031659.1-201ENST00000447075 539 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 DPPA3P1-201ENST00000448050 469 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 RNU6-416P-201ENST00000516265 103 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AC015720.1-201ENST00000565251 277 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 MIR3935-201ENST00000583472 104 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 BNIP3P24-201ENST00000593398 557 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 MIR7515-201ENST00000637837 67 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 HSPE1P11-201ENST00000339579 310 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 RNA5SP471-201ENST00000516971 106 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 IGJP1-201ENST00000522682 475 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AC087441.2-201ENST00000529141 262 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AL138976.2-201ENST00000563989 694 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 SNORD39.3-201ENST00000584451 71 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 DUXAP9-208ENST00000622815 614 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 AC040168.1-201ENST00000623594 991 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.72□□□□□ -2.13
SCN10AQ9Y5Y9 ZNF849P-201ENST00000594711 1566 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 MTND4LP14-201ENST00000429447 288 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 RPL31P54-201ENST00000429803 370 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 AL353691.1-201ENST00000451332 387 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 COX7A2P2-201ENST00000505291 250 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 MTCYBP27-201ENST00000555160 670 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 OR4K8P-201ENST00000578842 1048 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 AL355877.2-201ENST00000603670 358 ntBASIC1.71□□□□□ -2.14
SCN10AQ9Y5Y9 AL391987.6-201ENST00000305671 199 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 Y_RNA.122-201ENST00000363331 96 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 RNU6-53P-201ENST00000365367 106 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 MIR325-201ENST00000385260 98 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 U3.20-201ENST00000390909 217 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 PGBD4P3-201ENST00000440731 581 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 TRGVB-201ENST00000453257 471 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 SNORA4-201ENST00000584302 138 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AP000238.1-201ENST00000608759 426 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AP005137.2-201ENST00000609238 400 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AP001486.3-201ENST00000615334 372 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AC079597.1-201ENST00000624306 508 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 PIGFP3-201ENST00000441918 722 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AL050341.1-201ENST00000447743 313 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 RPS15AP36-201ENST00000492022 382 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AC147055.4-201ENST00000504399 745 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 SNORA48.10-201ENST00000516965 160 ntBASIC1.7□□□□□ -2.14
SCN10AQ9Y5Y9 SNORD19.2-201ENST00000516978 73 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 236.5 ms