Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC004852.3-201ENST00000614131 326 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AP001052.1-201ENST00000626421 99 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AC233263.6-201ENST00000631132 1963 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-1329P-201ENST00000365664 107 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 U3.37-201ENST00000408528 213 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 RNA5SP31-201ENST00000411144 127 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AC023141.9-201ENST00000458734 412 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AP002884.2-201ENST00000471647 395 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 RN7SKP24-201ENST00000515888 284 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 SNORA70.14-201ENST00000516205 110 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 TRMT10BP1-201ENST00000519377 943 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AL391261.3-201ENST00000557194 520 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 OR13C1P-202ENST00000641378 2919 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 CPHL1P-201ENST00000461341 3407 ntBASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GTF3C3Q9Y5Q9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-37P-201ENST00000362692 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-11P-201ENST00000364234 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-7-201ENST00000364784 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 Y_RNA.339-201ENST00000365325 102 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-8-201ENST00000365467 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-25P-201ENST00000383873 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-1-201ENST00000383898 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-48P-201ENST00000384161 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-36P-201ENST00000384172 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-4P-201ENST00000384205 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-5P-201ENST00000384238 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-3P-201ENST00000384314 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-16P-201ENST00000384385 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-15P-201ENST00000384534 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-2-201ENST00000384627 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-29P-201ENST00000384637 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-9-201ENST00000384776 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-33P-201ENST00000384793 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 MIR548F5-201ENST00000408421 86 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 SETP5-201ENST00000437270 562 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 HIGD1AP2-201ENST00000446367 280 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 MTND1P17-201ENST00000448961 204 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC010099.1-201ENST00000455434 375 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC130509.1-201ENST00000464158 433 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RN7SL244P-201ENST00000493405 297 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-277P-201ENST00000516272 106 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AP005639.2-201ENST00000527592 928 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AP000867.2-201ENST00000532468 320 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC245389.1-201ENST00000605141 529 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-6P-201ENST00000606623 107 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC022467.1-201ENST00000614738 749 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AL161629.2-201ENST00000615347 275 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AC010378.1-201ENST00000619270 362 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 AL591926.1-201ENST00000620542 217 ntBASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
GTF3C3Q9Y5Q9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.84□□□□□ -1.48
GTF3C3Q9Y5Q9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
GTF3C3Q9Y5Q9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
GTF3C3Q9Y5Q9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC110491.1-201ENST00000562191 2010 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 RNU6-593P-201ENST00000364716 112 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 RHEBP3-201ENST00000411920 351 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC068587.1-201ENST00000483613 781 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 MTND5P5-201ENST00000503764 376 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC011853.1-201ENST00000518911 454 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 MTND4LP5-201ENST00000605152 292 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 AL355365.1-201ENST00000616480 294 ntBASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.83□□□□□ -1.48
GTF3C3Q9Y5Q9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms