Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC084851.1-201ENST00000529105 249 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AP000867.2-201ENST00000532468 320 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AL121576.1-201ENST00000556055 276 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR4644-201ENST00000579929 84 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC025165.5-201ENST00000602802 578 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 DUSP12P1-201ENST00000612874 516 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RNA5SP124-201ENST00000362739 110 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-395P-201ENST00000365662 106 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 SNORA69-201ENST00000383895 132 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-116P-201ENST00000384042 109 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU1-89P-201ENST00000384592 164 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-780P-201ENST00000391030 104 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 HMGN2P30-201ENST00000423237 256 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL133547.1-201ENST00000448546 220 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC073415.1-201ENST00000449240 153 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 HMGB3P8-201ENST00000449709 577 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RPL12P25-201ENST00000455592 494 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 SNRPFP3-201ENST00000457792 225 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC233702.1-201ENST00000482905 502 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AP002812.1-201ENST00000495378 474 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 RN7SKP219-201ENST00000516825 296 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 Y_RNA.704-201ENST00000516851 102 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL157871.3-201ENST00000557231 293 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR1273C-201ENST00000578669 77 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL121772.2-201ENST00000614331 297 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AL391261.4-201ENST00000616012 481 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 CR392039.5-201ENST00000623201 510 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 AC233263.6-201ENST00000631132 1963 ntBASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
COL4A3BPQ9Y5P4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 CKAP2P1-201ENST00000555477 2049 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RNY4P14-201ENST00000363656 96 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 U8.11-201ENST00000384699 133 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 U8.12-201ENST00000384701 133 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR548F1-201ENST00000408667 84 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC099548.1-201ENST00000421443 426 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AL158156.1-201ENST00000422509 473 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AL591419.1-201ENST00000427423 339 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC003071.1-201ENST00000451219 789 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 U8.18-201ENST00000459285 133 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC084198.1-201ENST00000477747 402 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC092436.1-201ENST00000506450 503 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC011352.1-201ENST00000512300 793 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RNA5SP143-201ENST00000516936 115 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC022695.1-201ENST00000522089 237 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 PSMA2P1-201ENST00000526365 646 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 OR5B10P-201ENST00000532869 642 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AK6P1-201ENST00000540219 478 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC107016.1-201ENST00000550463 337 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AL137849.1-201ENST00000604767 169 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms