Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 Y_RNA.399-201ENST00000383955 105 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 Y_RNA.534-201ENST00000384599 112 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR493-201ENST00000385254 89 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-1009P-201ENST00000390996 107 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AL138878.1-201ENST00000405131 347 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 RPL21P65-201ENST00000406094 466 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AL162578.1-201ENST00000406202 378 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SKP53-201ENST00000411337 315 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 TMEM167AP1-201ENST00000423409 219 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 GPM6BP2-201ENST00000432046 144 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 HSPD1P21-201ENST00000436541 245 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 Z82210.1-201ENST00000440037 231 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 GPM6BP1-201ENST00000446387 144 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 MTCO2P30-201ENST00000503662 364 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 PSMA3P-201ENST00000555485 635 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AC012603.1-201ENST00000606424 528 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 U2.17-201ENST00000611454 95 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 AC006133.1-201ENST00000617106 264 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR6875-201ENST00000617506 72 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 RLIMP1-201ENST00000339626 1680 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-512P-201ENST00000364438 103 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU4-20P-201ENST00000365601 151 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-1127P-201ENST00000384580 107 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 Y_RNA.530-201ENST00000384587 101 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RPL35AP12-201ENST00000425362 338 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RPL7P2-201ENST00000427639 268 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC007919.1-201ENST00000429380 217 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RPL23AP46-201ENST00000438548 490 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RPL7P12-201ENST00000446719 750 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 HMGN2P16-201ENST00000456802 261 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-1208P-201ENST00000459588 107 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC004801.2-202ENST00000463559 283 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SL542P-201ENST00000467147 294 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SL604P-201ENST00000492589 296 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC008628.2-201ENST00000502605 298 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR1273C-201ENST00000578669 77 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC244505.7-201ENST00000599675 272 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 Z98200.1-201ENST00000607298 470 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AL110115.1-201ENST00000614396 364 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AL512643.1-201ENST00000635735 524 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC121333.1-201ENST00000567488 2709 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 AC002546.1-201ENST00000588041 2504 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 CUL1P1-201ENST00000509510 2425 ntBASIC4.01□□□□□ -1.77
PCDHGA3Q9Y5H0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AL139397.2-201ENST00000404529 772 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 Z98941.1-201ENST00000407764 100 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC007389.2-201ENST00000434630 306 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 NDUFB4P6-201ENST00000436819 366 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 ABCF2P2-201ENST00000450549 296 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC012181.1-201ENST00000479895 423 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC025554.1-201ENST00000505641 188 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms