Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 MTND5P17-201ENST00000418405 1603 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 NACAP2-201ENST00000318548 624 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 Y_RNA.86-201ENST00000363020 111 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-1155P-201ENST00000363554 107 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 RNA5SP50-201ENST00000363731 107 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-641P-201ENST00000384006 107 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 UBE2FP1-201ENST00000416536 447 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AP000907.1-201ENST00000428428 510 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 MTATP6P16-201ENST00000434543 526 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 RPL36AP6-201ENST00000435770 321 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 GMFBP1-201ENST00000467831 427 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 RPS27AP1-201ENST00000475545 471 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 HMGN1P12-201ENST00000499125 195 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AC026427.2-201ENST00000506228 536 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AC026801.2-201ENST00000515352 425 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 MIR4293-201ENST00000584305 78 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AL137849.1-201ENST00000604767 169 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AC093648.1-201ENST00000623546 606 ntBASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX2IPQ9Y2D8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 RPL7P26-201ENST00000333817 754 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-1284P-201ENST00000363701 100 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 RNU5E-6P-201ENST00000365574 115 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 MIR135A2-201ENST00000384854 100 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 MIR491-201ENST00000384877 84 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AL136116.1-201ENST00000403591 381 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 RPL21P24-201ENST00000413752 448 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 SDCBPP3-201ENST00000419629 891 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC099677.1-201ENST00000420575 175 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 MTND4P28-201ENST00000426217 387 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC073063.1-201ENST00000434352 607 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 CACYBPP2-201ENST00000453625 678 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 RNU7-182P-201ENST00000459009 62 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC084198.1-201ENST00000477747 402 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 RPL39P36-201ENST00000490784 156 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 MTCO2P30-201ENST00000503662 364 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AP000889.1-201ENST00000530968 660 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC018630.1-201ENST00000541376 925 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC123904.3-201ENST00000547218 814 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 ARL2BPP2-201ENST00000550907 489 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC126177.3-201ENST00000551839 688 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 MIR3922-201ENST00000585192 84 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 TUG1_2.1-201ENST00000614234 87 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 MIR4275-201ENST00000636486 87 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 AP000553.6-201ENST00000641242 118 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SSX2IPQ9Y2D8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 Y_RNA.11-201ENST00000362375 109 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AL583834.1-201ENST00000406943 343 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 SNORA11.2-201ENST00000408318 127 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RNU2-36P-201ENST00000410361 191 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 SETP5-201ENST00000437270 562 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 SNORA71B-202ENST00000439232 272 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AL162389.1-201ENST00000449233 177 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RPL38P4-201ENST00000502376 214 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC010486.1-201ENST00000511793 424 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms