Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC006499.2-201ENST00000513470 337 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 MTCO3P27-201ENST00000514397 196 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 AP003355.1-201ENST00000518956 587 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 AL445264.1-201ENST00000621719 171 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 RNU6-637P-201ENST00000384050 107 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 MIR888-201ENST00000401186 77 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 RNA5SP80-201ENST00000410475 111 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 RNU6-920P-201ENST00000410926 92 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 PTGES3P1-201ENST00000439531 483 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 ARF4P4-201ENST00000439608 520 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 RPL7P36-201ENST00000444633 681 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC002381.1-201ENST00000447049 280 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC017099.1-201ENST00000448261 1028 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AL353705.4-201ENST00000449661 238 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 ANKRD26P4-201ENST00000455755 950 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 snoU13.8-201ENST00000458890 104 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 DYNLL1P5-201ENST00000467158 270 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC104090.1-201ENST00000506341 1171 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 RNU6-583P-201ENST00000516012 92 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 SNORA31.6-201ENST00000516241 130 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 RNU6-1225P-201ENST00000516336 65 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 SCARNA16.3-201ENST00000516595 184 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 RNU6-840P-201ENST00000517275 65 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AP003497.1-201ENST00000528472 562 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AL359212.1-201ENST00000556608 614 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC104072.1-201ENST00000568817 668 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AP000403.1-201ENST00000603349 851 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC021749.1-201ENST00000604322 607 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC099785.1-201ENST00000605697 437 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AL589743.7-201ENST00000612637 233 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC025594.3-201ENST00000613068 790 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AL590808.1-201ENST00000618696 141 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC109454.4-201ENST00000623411 649 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 MTND5P6-201ENST00000422338 1798 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AL138713.1-201ENST00000624026 2130 ntBASIC1.51□□□□□ -2.17
HHLA3Q9XRX5 AC004520.1-201ENST00000608362 1413 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC010329.5-201ENST00000623497 2174 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 RNU6-1078P-201ENST00000364522 103 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 TPMTP3-201ENST00000411928 735 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AL451054.2-201ENST00000420896 202 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 DPH3P2-201ENST00000422618 250 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 OSTCP8-201ENST00000445117 448 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AL118520.1-201ENST00000450770 291 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 RPL18AP17-201ENST00000455326 198 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 KLF3P2-201ENST00000465138 268 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC023141.11-201ENST00000508864 202 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 RNA5SP291-201ENST00000517222 105 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC008749.1-201ENST00000597650 306 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC008121.1-201ENST00000603244 268 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AL096840.1-201ENST00000603287 93 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC009314.1-201ENST00000603871 304 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC069545.1-201ENST00000605671 358 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC024257.5-201ENST00000612739 531 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 SDR42E1P2-201ENST00000614861 481 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC023158.2-201ENST00000614876 543 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AL357080.1-201ENST00000617394 239 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 AC064859.1-201ENST00000624741 174 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 MIR4275-201ENST00000636486 87 ntBASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.5□□□□□ -2.17
HHLA3Q9XRX5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
HHLA3Q9XRX5 RNU6-359P-201ENST00000365466 108 ntBASIC1.49□□□□□ -2.17
HHLA3Q9XRX5 RSL24D1P4-201ENST00000400938 484 ntBASIC1.49□□□□□ -2.17
HHLA3Q9XRX5 RNA5SP489-201ENST00000410986 109 ntBASIC1.49□□□□□ -2.17
HHLA3Q9XRX5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms