Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-283P-201ENST00000364788 107 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 MIR1289-1-201ENST00000408836 144 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 USP9YP18-201ENST00000425912 695 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 MTCO2P11-201ENST00000431069 680 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AL353705.1-201ENST00000433468 480 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 UBE2V1P8-201ENST00000437166 265 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AC097462.2-201ENST00000504623 481 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 RNU6-1178P-201ENST00000516674 107 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 SNORA70.19-201ENST00000516717 90 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 RNU6-445P-201ENST00000516949 107 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AC068944.2-201ENST00000610373 403 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 MIR4275-201ENST00000636486 87 ntBASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CDK11AQ9UQ88 DDX10P1-201ENST00000448545 1933 ntBASIC5.15□□□□□ -1.58
CDK11AQ9UQ88 OR1S2-201ENST00000302592 978 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 Y_RNA.1-201ENST00000352915 104 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 RNU1-140P-201ENST00000365040 165 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AL138885.1-201ENST00000405921 675 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 MIR548F1-201ENST00000408667 84 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 COTL1P1-201ENST00000422309 375 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 TMEM167AP1-201ENST00000423409 219 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC079382.1-201ENST00000493346 557 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC135721.1-201ENST00000497954 479 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AL359273.1-201ENST00000510918 627 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC011352.1-201ENST00000512300 793 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC006504.3-201ENST00000586818 523 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC006338.1-201ENST00000618453 749 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC022149.2-201ENST00000621061 203 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AL359880.1-201ENST00000621879 266 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 AC019226.1-201ENST00000625666 515 ntBASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.15□□□□□ -1.59
CDK11AQ9UQ88 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 Y_RNA.9-201ENST00000362354 101 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 RPS4XP3-201ENST00000398541 413 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AL109755.1-201ENST00000401791 649 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AL354719.1-201ENST00000406535 843 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 MTATP6P30-201ENST00000443540 664 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AL049714.1-201ENST00000466686 347 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC105224.1-201ENST00000587055 421 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC093732.2-201ENST00000607950 274 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AL157817.1-201ENST00000614264 790 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AL157786.1-207ENST00000627771 695 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 AC005183.1-201ENST00000603687 1979 ntBASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK11AQ9UQ88 ELF2P3-201ENST00000445099 1506 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AC092326.2-201ENST00000624772 1561 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 SNORA1.3-201ENST00000384676 136 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AL590002.1-201ENST00000406554 418 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AC007283.2-201ENST00000424739 197 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 RN7SL863P-201ENST00000462370 296 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AC022616.3-201ENST00000523940 148 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AP003072.2-201ENST00000527756 676 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AP003034.1-201ENST00000534621 422 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms