Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 AC107294.1-201ENST00000609524 467 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 RMST_4.1-201ENST00000616886 107 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 SDAD1P2-201ENST00000441308 2028 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTN3Q9P232 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 OR56B2P-202ENST00000641377 2453 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 Z95331.1-201ENST00000623075 23112 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC021146.4-201ENST00000309229 279 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 Y_RNA.48-201ENST00000362710 103 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 RNU6-770P-201ENST00000363929 105 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 SNORA20.1-201ENST00000364790 130 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 Y_RNA.376-201ENST00000365638 108 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 RNU6-1179P-201ENST00000384667 107 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 MT-TW-201ENST00000387382 68 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AL513475.1-201ENST00000406602 315 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AL513331.1-201ENST00000411908 397 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 ELOCP20-201ENST00000422460 345 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 RPEP3-201ENST00000425462 676 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AL451062.2-201ENST00000427515 271 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 DNAJC19P7-201ENST00000428811 344 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC068287.1-201ENST00000430283 295 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 USP9YP7-201ENST00000436723 430 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC009220.1-201ENST00000451614 275 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 USP9YP32-201ENST00000452432 430 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 SCARNA10-201ENST00000459255 330 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 RN7SL346P-201ENST00000491561 294 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 OR51K1P-201ENST00000510214 950 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 NDUFB4P9-201ENST00000511646 388 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC007375.1-201ENST00000554513 578 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC005951.2-201ENST00000576282 495 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 AP000787.2-201ENST00000604432 568 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 AC126323.6-202ENST00000568092 3511 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 ZNF72P-201ENST00000425869 1908 ntBASIC5.01□□□□□ -1.61
CNTN3Q9P232 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.01□□□□□ -1.61
CNTN3Q9P232 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNTN3Q9P232 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CNTN3Q9P232 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTN3Q9P232 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTN3Q9P232 AL365440.1-201ENST00000436135 2167 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AC083843.3-201ENST00000623679 2186 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CNTN3Q9P232 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
CNTN3Q9P232 Y_RNA.14-201ENST00000362415 103 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 Y_RNA.478-201ENST00000384358 107 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 MIR141-201ENST00000384975 95 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 SAR1AP2-201ENST00000392696 594 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5□□□□□ -1.61
CNTN3Q9P232 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5□□□□□ -1.61
CNTN3Q9P232 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5□□□□□ -1.61
CNTN3Q9P232 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5□□□□□ -1.61
CNTN3Q9P232 RPL26P6-201ENST00000440913 438 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5□□□□□ -1.61
CNTN3Q9P232 snoU13.1-201ENST00000459157 104 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 RPL39P38-201ENST00000467018 153 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5□□□□□ -1.61
CNTN3Q9P232 Y_RNA.680-201ENST00000516441 93 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 RNU6-911P-201ENST00000516523 104 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 RAB9BP1-201ENST00000519581 626 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 HSPE1P20-201ENST00000538133 289 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 TRAV32-201ENST00000553993 340 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AC026470.2-201ENST00000561492 181 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 MIR3128-201ENST00000581957 66 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 RPS29P30-201ENST00000600975 111 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AC006023.2-201ENST00000609916 167 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AL355810.1-201ENST00000614629 552 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AL512643.1-201ENST00000635735 524 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CNTN3Q9P232 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTN3Q9P232 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CNTN3Q9P232 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CNTN3Q9P232 AL136164.3-201ENST00000624429 3978 ntBASIC5□□□□□ -1.61
CNTN3Q9P232 AC009812.4-201ENST00000569134 1805 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms