Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNU1-103P-201ENST00000516502 125 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 SNORA31.21-201ENST00000517180 77 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 RAB9BP1-201ENST00000519581 626 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 MRPL49P2-201ENST00000521066 465 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 YPEL5P3-201ENST00000547227 352 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AL391261.3-201ENST00000557194 520 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 MIR4700-201ENST00000578311 74 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AP001094.1-201ENST00000579805 193 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC091167.4-201ENST00000605079 184 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 RNU4-89P-201ENST00000607443 133 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC068944.2-201ENST00000610373 403 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AL357559.1-201ENST00000622228 274 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX56Q9NY93 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX56Q9NY93 SRP72P2-201ENST00000344851 1979 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX56Q9NY93 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 NCAPGP1-201ENST00000505112 1814 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 NACAP2-201ENST00000318548 624 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 RNA5SP322-201ENST00000363617 119 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 RNY4P14-201ENST00000363656 96 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 RNA5SP130-201ENST00000364431 114 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 Y_RNA.381-201ENST00000365666 102 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AL139039.1-201ENST00000401900 692 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AL691449.1-201ENST00000426570 421 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AL158071.1-201ENST00000430315 461 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 ATP5JP1-201ENST00000431631 322 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AL118520.1-201ENST00000450770 291 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 RPL21P41-201ENST00000459863 264 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC006463.2-201ENST00000473326 348 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC114786.4-201ENST00000508771 728 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 SNORA31.9-201ENST00000516429 84 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 Y_RNA.704-201ENST00000516851 102 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 AP005435.4-201ENST00000529514 284 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 HIF1AP1-201ENST00000553642 175 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC090877.1-201ENST00000561418 344 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 MIR3939-201ENST00000582614 106 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 U6.99-201ENST00000637524 83 ntBASIC4.07□□□□□ -1.76
DDX56Q9NY93 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX56Q9NY93 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
DDX56Q9NY93 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX56Q9NY93 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX56Q9NY93 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX56Q9NY93 AP004289.2-201ENST00000444413 1457 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX56Q9NY93 RNU6-483P-201ENST00000384088 108 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 Y_RNA.450-201ENST00000384198 113 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 SNORD115-47-201ENST00000391226 86 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 HMGN2P8-201ENST00000391458 268 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AL606923.1-201ENST00000406616 190 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 BTF3P7-201ENST00000407097 488 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AL353729.1-201ENST00000425044 720 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 MTCO1P20-201ENST00000425366 358 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AC098614.2-201ENST00000426040 255 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AL714022.1-201ENST00000439897 151 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 CACYBPP2-201ENST00000453625 678 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 RNU7-170P-201ENST00000459303 61 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AL121769.1-201ENST00000469473 401 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 RPL21P13-201ENST00000488305 481 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 HMGB1P30-201ENST00000492455 606 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AC139453.3-201ENST00000493276 369 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 AC079140.5-201ENST00000507882 310 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 RNA5SP143-201ENST00000516936 115 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 AK6P1-201ENST00000540219 478 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 MTCO3P24-201ENST00000572729 782 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 MIR4782-201ENST00000577987 79 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AC012468.1-201ENST00000604888 430 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 U2.21-201ENST00000637295 81 ntBASIC4.06□□□□□ -1.76
DDX56Q9NY93 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms