Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SNRPEP8-201ENST00000442866 260 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 RPL7P12-201ENST00000446719 750 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC026726.1-201ENST00000512859 601 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC099522.1-202ENST00000514718 367 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC107953.1-201ENST00000522216 297 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 MTCO3P23-201ENST00000561363 289 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC121333.1-201ENST00000567488 2709 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4□□□□□ -1.77
MKS1Q9NXB0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4□□□□□ -1.77
MKS1Q9NXB0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4□□□□□ -1.77
MKS1Q9NXB0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4□□□□□ -1.77
MKS1Q9NXB0 AL049641.1-201ENST00000441055 1948 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MKS1Q9NXB0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
MKS1Q9NXB0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4□□□□□ -1.77
MKS1Q9NXB0 SNORA60-201ENST00000362396 134 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 SNORA32.2-201ENST00000384049 122 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4□□□□□ -1.77
MKS1Q9NXB0 POLHP1-201ENST00000411806 470 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 BX682237.1-201ENST00000415016 335 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 AC092047.1-201ENST00000424997 240 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 RPL35AP12-201ENST00000425362 338 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4□□□□□ -1.77
MKS1Q9NXB0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4□□□□□ -1.77
MKS1Q9NXB0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4□□□□□ -1.77
MKS1Q9NXB0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4□□□□□ -1.77
MKS1Q9NXB0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4□□□□□ -1.77
MKS1Q9NXB0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4□□□□□ -1.77
MKS1Q9NXB0 FAM206BP-201ENST00000510179 541 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 RNU2-69P-201ENST00000516061 100 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 BTF3P12-201ENST00000519620 469 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 AP003122.3-201ENST00000526316 255 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 AC084851.1-201ENST00000529105 249 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4□□□□□ -1.77
MKS1Q9NXB0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4□□□□□ -1.77
MKS1Q9NXB0 MIR1273C-201ENST00000578669 77 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 BNIP3P25-201ENST00000596023 559 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 AC136601.2-201ENST00000604356 474 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 LARP7P1-201ENST00000605576 316 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 AC093913.1-201ENST00000614178 329 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 Y_RNA.804-201ENST00000615262 101 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 AC009248.2-201ENST00000619826 254 ntBASIC4□□□□□ -1.77
MKS1Q9NXB0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4□□□□□ -1.77
MKS1Q9NXB0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MKS1Q9NXB0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
MKS1Q9NXB0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 SNORD35B-201ENST00000363660 87 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 RNVU1-6-201ENST00000364688 164 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 RNU6-45P-201ENST00000384471 107 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 RNU6-1009P-201ENST00000390996 107 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 MIR937-201ENST00000401271 86 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 RPS4XP9-201ENST00000405151 780 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AC016769.2-201ENST00000414815 475 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 MTCO3P46-201ENST00000425787 232 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 SNORA71B-202ENST00000439232 272 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 CECR9-201ENST00000453421 199 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AL135752.1-201ENST00000479477 471 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AC083904.1-201ENST00000487828 231 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AL157871.3-201ENST00000557231 293 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 MIR548AC-201ENST00000585049 88 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AC092747.3-201ENST00000603769 301 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 U2.17-201ENST00000611454 95 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AL161616.1-201ENST00000611867 286 ntBASIC3.99□□□□□ -1.77
MKS1Q9NXB0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MKS1Q9NXB0 AC002546.1-201ENST00000588041 2504 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AL359693.1-201ENST00000614959 2407 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 RNU6-510P-201ENST00000391239 108 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AL591034.1-201ENST00000407447 340 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 RHEBP3-201ENST00000411920 351 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 RPL21P90-201ENST00000415692 466 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 RPL21P109-201ENST00000422213 475 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AL512844.2-201ENST00000433990 593 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms