Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 HSPE1P11-201ENST00000339579 310 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 RNU6-511P-201ENST00000363496 107 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 RNU6-1284P-201ENST00000363701 100 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 RNU6-877P-201ENST00000383868 107 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 Y_RNA.390-201ENST00000383932 102 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC096664.2-201ENST00000411843 406 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 MRPL50P2-201ENST00000416821 482 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC008850.1-201ENST00000427546 362 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 RPL7L1P10-201ENST00000427790 463 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC005094.1-201ENST00000440420 368 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 RN7SL601P-201ENST00000471221 293 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC083798.1-201ENST00000472671 131 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 RPS27AP1-201ENST00000475545 471 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 RNU6-64P-201ENST00000517119 105 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC007991.1-201ENST00000522680 631 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 MIR4474-201ENST00000579189 78 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC008752.3-201ENST00000588113 712 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC106900.2-201ENST00000604994 317 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC009570.1-201ENST00000609599 745 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 AL136313.1-201ENST00000624804 202 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 MIR3651-201ENST00000630427 90 ntBASIC3.83□□□□□ -1.8
VPS45Q9NRW7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS45Q9NRW7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 ZNF680P1-201ENST00000436625 1469 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RNU6-74P-201ENST00000384235 107 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RNU6-39P-201ENST00000384344 107 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 MIR558-201ENST00000384920 94 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RNA5SP424-201ENST00000390988 115 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 TXNP7-201ENST00000406296 293 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RNA5SP107-201ENST00000411358 122 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AL159169.1-201ENST00000421119 127 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC018630.2-202ENST00000422992 927 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RPS20P5-201ENST00000434808 360 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RPL21P23-201ENST00000446654 460 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 DPPA3P1-201ENST00000448050 469 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RPS3AP46-201ENST00000448352 682 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 FDX1P2-201ENST00000450769 375 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RNU6-420P-201ENST00000458780 107 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC008481.1-201ENST00000463278 396 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RPS15AP36-201ENST00000492022 382 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RNU7-51P-201ENST00000516560 62 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC106782.4-201ENST00000568264 210 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 SNHG22-203ENST00000617833 660 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 FER-210ENST00000628534 558 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS45Q9NRW7 AC007656.2-201ENST00000624902 4547 ntBASIC3.82□□□□□ -1.8
VPS45Q9NRW7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC091152.2-201ENST00000591628 2569 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 MIR1-2-201ENST00000384961 85 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 SOD2P1-201ENST00000396543 562 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 RNU2-9P-201ENST00000410194 145 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 ZNF90P2-204ENST00000419323 1075 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AL139413.1-201ENST00000421309 217 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms