Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 OR51A3P-201ENST00000413596 924 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 EIF4EP2-201ENST00000422816 654 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 MTND2P29-201ENST00000438595 412 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 UBE2V2P4-201ENST00000447495 259 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 RPL9P9-202ENST00000466501 579 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 SCARNA3-201ENST00000517097 143 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 AC034114.1-201ENST00000520293 285 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 AL731537.2-201ENST00000561565 951 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 AC079148.1-201ENST00000565944 819 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 AC005668.1-201ENST00000571142 476 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 OR4G11P-202ENST00000642116 1414 ntBASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SMCO4Q9NRQ5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 MIR518A2-201ENST00000384966 87 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 MIR218-1-201ENST00000384999 110 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 SNORA26.9-201ENST00000391322 122 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 CR848007.2-201ENST00000424918 787 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 AL354941.1-201ENST00000438600 464 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 OR6C72P-201ENST00000451403 892 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 PABPC1P3-201ENST00000469174 459 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 AC087343.1-201ENST00000477341 475 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 UBL5P1-201ENST00000507979 193 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 MIR4421-201ENST00000578133 69 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 MIR4672-201ENST00000583126 81 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 MTCO3P22-201ENST00000603219 784 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 AC012213.4-201ENST00000606457 354 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 AC110792.4-201ENST00000609843 298 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 AL355472.4-201ENST00000610233 626 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 VN1R9P-201ENST00000614184 867 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 AC012676.2-201ENST00000619258 186 ntBASIC0.68□□□□□ -2.3
SMCO4Q9NRQ5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 RNU6-1083P-201ENST00000384022 107 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 UBE2V1P2-201ENST00000397758 440 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 SUMO2P6-201ENST00000505273 288 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AC109927.2-201ENST00000506416 303 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AC084364.2-201ENST00000546924 395 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 DPRXP5-201ENST00000604662 539 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AC068057.2-201ENST00000624047 895 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
SMCO4Q9NRQ5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 RNU1-78P-201ENST00000391248 165 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 RPL27AP8-201ENST00000424277 446 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AL035407.1-201ENST00000429211 571 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 HMGB1P27-201ENST00000431429 603 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 RNU6-420P-201ENST00000458780 107 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AL672167.3-201ENST00000465951 960 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 RPS20P22-201ENST00000473700 357 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 RPL31P60-201ENST00000478450 367 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AF213884.2-201ENST00000510417 903 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 RNU7-40P-201ENST00000516397 64 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 OR8K4P-201ENST00000534608 872 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AC008945.2-201ENST00000606056 604 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AC022202.1-201ENST00000613515 211 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AL392048.1-201ENST00000613946 534 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 AL136313.1-201ENST00000624804 202 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 MTND5P28-201ENST00000438005 1594 ntBASIC0.66□□□□□ -2.3
SMCO4Q9NRQ5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
SMCO4Q9NRQ5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
SMCO4Q9NRQ5 AL391516.1-201ENST00000554380 2449 ntBASIC0.65□□□□□ -2.31
SMCO4Q9NRQ5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SMCO4Q9NRQ5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SMCO4Q9NRQ5 RPL23AP29-201ENST00000397284 453 ntBASIC0.65□□□□□ -2.31
SMCO4Q9NRQ5 AL606490.8-201ENST00000441624 319 ntBASIC0.65□□□□□ -2.31
SMCO4Q9NRQ5 RPS4XP11-201ENST00000446897 772 ntBASIC0.65□□□□□ -2.31
SMCO4Q9NRQ5 ARPC3P5-201ENST00000448802 534 ntBASIC0.65□□□□□ -2.31
SMCO4Q9NRQ5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms