Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.96
HPS4Q9NQG7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HPS4Q9NQG7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 RNU1-35P-201ENST00000362782 153 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 RNU6-1035P-201ENST00000384477 107 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 MIR19A-201ENST00000384878 82 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 MTCO3P45-201ENST00000443036 613 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 RPL39P40-201ENST00000445481 146 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 RPS3P1-201ENST00000456781 192 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 CDC42P4-201ENST00000510507 563 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AP000857.1-201ENST00000532151 543 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AL133153.1-201ENST00000557756 303 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 MTND3P12-201ENST00000559068 328 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AC234778.2-201ENST00000566241 354 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 ISCA1P3-201ENST00000577104 373 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AL353778.1-201ENST00000603149 408 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AC004908.2-201ENST00000609090 574 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AC091965.5-201ENST00000624785 342 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 AC006378.2-201ENST00000623178 2476 ntBASIC2.83□□□□□ -1.96
HPS4Q9NQG7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HPS4Q9NQG7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 RNU6-198P-201ENST00000384258 104 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 TAS2R15P-201ENST00000390674 928 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AL356057.3-201ENST00000402607 340 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AL590004.2-201ENST00000404787 371 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 CCNG1P1-201ENST00000406783 885 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AL096701.2-201ENST00000416920 238 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AL451054.2-201ENST00000420896 202 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC092047.1-201ENST00000424997 240 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 LARP1BP3-201ENST00000437229 869 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 MTND1P26-201ENST00000440488 538 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 BNIP3P2-201ENST00000441221 577 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC055855.1-201ENST00000489563 579 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC098862.1-201ENST00000504991 413 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 SNORA3.4-201ENST00000515969 96 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 MTATP6P15-201ENST00000527233 835 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 TRAV28-201ENST00000557548 323 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC009094.1-201ENST00000564443 426 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC091965.4-201ENST00000607691 587 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC007038.2-201ENST00000608095 740 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC107214.2-201ENST00000608204 634 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC120349.3-201ENST00000624377 529 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC017037.3-201ENST00000625016 472 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC010149.2-201ENST00000637608 315 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC104454.1-201ENST00000421341 1401 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HPS4Q9NQG7 AC092447.7-201ENST00000422212 1621 ntBASIC2.82□□□□□ -1.96
HPS4Q9NQG7 RNU6-660P-201ENST00000364566 109 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 RNU6-741P-201ENST00000383889 107 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AL513331.1-201ENST00000411908 397 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 VPS26BP1-201ENST00000417155 755 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 OOSP1P1-201ENST00000423265 274 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 MTATP6P17-201ENST00000431030 672 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AL008629.1-201ENST00000438615 184 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 BMI1P1-201ENST00000445879 941 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC008481.1-201ENST00000463278 396 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms