Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.33
RTN4Q9NQC3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RTN4Q9NQC3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RTN4Q9NQC3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
RTN4Q9NQC3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RTN4Q9NQC3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RTN4Q9NQC3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 SNORA20.1-201ENST00000364790 130 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 RNA5SP85-201ENST00000365378 119 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 UBBP2-201ENST00000376781 231 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 Y_RNA.562-201ENST00000384695 113 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 RNA5SP38-201ENST00000410750 119 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AL645939.3-201ENST00000435408 225 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 FRG2FP-204ENST00000453982 852 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 SNRPGP3-201ENST00000469405 227 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 RPS23P5-201ENST00000495419 428 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 RNU6-570P-201ENST00000517051 105 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AL078624.2-201ENST00000605063 554 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AL133481.2-203ENST00000607558 139 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 SNORA74.4-201ENST00000607595 199 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 RN7SL261P-201ENST00000613441 282 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AC005296.1-201ENST00000616145 209 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.71□□□□□ -1.34
RTN4Q9NQC3 AP001148.1-201ENST00000624124 2359 ntBASIC6.71□□□□□ -1.34
RTN4Q9NQC3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AC106871.1-201ENST00000568324 3102 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AL672167.1-204ENST00000641875 3017 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 MIR335-201ENST00000362173 94 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 RNU6-222P-201ENST00000362438 107 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 RNU6-806P-201ENST00000365147 105 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AL157702.1-201ENST00000398764 426 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 PRELID1P1-201ENST00000403549 660 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 RNU2-25P-201ENST00000411041 191 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AL353748.1-201ENST00000440753 474 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AC096638.1-201ENST00000444678 216 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 COX4I1P2-201ENST00000447446 547 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 SSXP4-201ENST00000451349 245 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 RNA5SP103-201ENST00000459503 118 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 HMGB3P16-201ENST00000508037 287 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 MIR4659A-201ENST00000580269 81 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 SNX18P12-201ENST00000624821 759 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 AC008725.1-201ENST00000605123 2263 ntBASIC6.7□□□□□ -1.34
RTN4Q9NQC3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RTN4Q9NQC3 MTND5P6-201ENST00000422338 1798 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 RNU6-1285P-201ENST00000363480 105 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 Y_RNA.515-201ENST00000384535 112 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 U8.22-201ENST00000459141 133 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 RPL7P51-201ENST00000490532 749 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 SNORA31.1-201ENST00000515993 133 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 SNORA31.5-201ENST00000516190 133 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 RN7SKP288-201ENST00000516227 268 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms